RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SEC24CP53992 1094 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 HPCAP84074 193 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 ZNF117Q03924 483 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 CHRNEQ04844 493 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 FADDQ13158 208 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 RGNQ15493 299 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 DCST1Q5T197 706 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 RTL6Q6ICC9 239 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 AAGABQ6PD74 315 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 DLEU7Q6UYE1 221 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 MCEMP1Q8IX19 187 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 DPP10Q8N608 796 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 ZNF614Q8N883 585 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 PMM1Q92871 262 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 ZG16BQ96DA0 208 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 WDYHV1Q96HA8 205 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 SH3YL1Q96HL8 342 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-202ENST00000452372 THUMPD1Q9NXG2 353 aaKnown RBP18.06■□□□□ 0.48
COL9A3-202ENST00000452372 VAPAQ9P0L0 249 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 AKAP9Q99996 3911 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 A0A087WZY1 265 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 SERINC4A6NH21 518 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 ENO4A6NNW6 628 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 LINC01387J3KSC0 135 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 GTPBP1O00178 669 aaKnown RBP18.05■□□□□ 0.48
COL9A3-202ENST00000452372 HCRTR2O43614 444 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 GMFGO60234 142 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 EIF4E2O60573 245 aaKnown RBP18.05■□□□□ 0.48
COL9A3-202ENST00000452372 TNFRSF21O75509 655 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 TFPTP0C1Z6 253 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 CPN1P15169 458 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 TCEA1P23193 301 aaKnown RBP18.05■□□□□ 0.48
COL9A3-202ENST00000452372 PPIBP23284 216 aaKnown RBP18.05■□□□□ 0.48
COL9A3-202ENST00000452372 ADSLP30566 484 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-202ENST00000452372 LSP1P33241 339 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 RNF144AP50876 292 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-202ENST00000452372 GYS2P54840 703 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 DSTNP60981 165 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 KLF10Q13118 480 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 MAPK11Q15759 364 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 MAPK14Q16539 360 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 XKRXQ6PP77 449 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 CBLN3Q6UW01 205 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 ENPP6Q6UWR7 440 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 ARSKQ6UWY0 536 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 B3GNT6Q6ZMB0 384 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 NCCRP1Q6ZVX7 275 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-202ENST00000452372 ULK2Q8IYT8 1036 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 MARVELD2Q8N4S9 558 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 SLC38A1Q9H2H9 487 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 MTHFD2LQ9H903 347 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-202ENST00000452372 P2RX2Q9UBL9 471 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 ICAM5Q9UMF0 924 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 CARD8Q9Y2G2 431 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 FAM215AQ9Y5M1 114 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 HEATR5AQ86XA9 2040 aa18.05■□□□□ 0.48
COL9A3-202ENST00000452372 CENPVL1A0A0U1RR11 272 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 ZNF264O43296 627 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 OIP5O43482 229 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 CHRM4P08173 479 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 BMP2P12643 396 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 AGAP20933 346 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 STARP49675 285 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 LHX2P50458 406 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 P2RX1P51575 399 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 SMSP52788 366 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 BCL2A1Q16548 175 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 TMEM44Q2T9K0 475 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 C1orf185Q5T7R7 199 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 RAET1LQ5VY80 246 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 RETREG3Q86VR2 466 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 RPRMLQ8N4K4 120 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 SLC38A5Q8WUX1 472 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 PIGQQ9BRB3 760 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 RUBCNLQ9H714 662 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 CAMK2AQ9UQM7 478 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 ARHGAP21Q5T5U3 1957 aa18.04■□□□□ 0.48
COL9A3-202ENST00000452372 OR2M5A3KFT3 312 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 GMNCA6NCL1 334 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 C19orf84I3L1E1 186 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 UBL4AP11441 157 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 PEPDP12955 493 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 SUMO3P55854 103 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-202ENST00000452372 PMPCAQ10713 525 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 FGFBP1Q14512 234 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 SF3B4Q15427 424 aaKnown RBP eCLIP18.03■□□□□ 0.485e-7■■■□□ 17.3
COL9A3-202ENST00000452372 RUNDC3AQ59EK9 446 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 EIF3MQ7L2H7 374 aaKnown RBP18.03■□□□□ 0.48
COL9A3-202ENST00000452372 SPATA21Q7Z572 469 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 ZBTB8AQ96BR9 441 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 ELAC2Q9BQ52 826 aaKnown RBP18.03■□□□□ 0.48
COL9A3-202ENST00000452372 TTYH2Q9BSA4 534 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 LAT2Q9GZY6 243 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 CHST11Q9NPF2 352 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 MED17Q9NVC6 651 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 CALML5Q9NZT1 146 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 VDAC3Q9Y277 283 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 ZNF337Q9Y3M9 751 aa18.03■□□□□ 0.48
COL9A3-202ENST00000452372 C7orf72A4D263 438 aa18.02■□□□□ 0.48
COL9A3-202ENST00000452372 TMEM247A6NEH6 219 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms