RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 KIAA0319Q5VV43 1072 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GGNBP1Q5YKI7 109 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 NIPAL3Q6P499 406 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ARL9Q6T311 187 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CES3Q6UWW8 571 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GLDNQ6ZMI3 551 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 FAM83HQ6ZRV2 1179 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 CBLL1Q75N03 491 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF627Q7L945 461 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TRMT11Q7Z4G4 463 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 CLEC14AQ86T13 490 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TMEM135Q86UB9 458 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC51AQ86UW1 340 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CNTN4Q8IWV2 1026 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 RIMKLAQ8IXN7 391 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 IQCF1Q8N6M8 205 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 NANOGP1Q8N7R0 232 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 BEND7Q8N7W2 519 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 TMEM145Q8NBT3 493 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR2T33Q8NG76 320 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR4K17Q8NGC6 315 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR5AP2Q8NGF4 316 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 RAET1EQ8TD07 263 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CREB3L4Q8TEY5 395 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 NUDCD2Q8WVJ2 157 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 HAS1Q92839 578 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ORAI1Q96D31 301 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 R3HDM4Q96D70 268 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 FAM122AQ96E09 287 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LRIG1Q96JA1 1093 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SENP8Q96LD8 212 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 FAM193BQ96PV7 902 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF587Q96SQ5 575 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 WDR77Q9BQA1 342 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 PRR14Q9BWN1 585 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 POLDIP3Q9BY77 421 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 TMEM39BQ9GZU3 492 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CTDSP1Q9GZU7 261 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR51I1Q9H343 314 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 BANF2Q9H503 90 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GDE1Q9NZC3 331 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 DNAJC27Q9NZQ0 273 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LRFN2Q9ULH4 789 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 UBIAD1Q9Y5Z9 338 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TMEM14AQ9Y6G1 99 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PAPPAQ13219 1627 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LOC100509620A0A075B734 347 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CXorf65A6NEN9 183 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MOXD2PA6NHM9 499 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 K7EPK0 472 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SURF4O15260 269 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF208O43345 1280 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PIP5K1CO60331 668 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CSO75390 466 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 OR4F21O95013 312 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PDYNP01213 254 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 HLA-DQB1P01920 261 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MT-ND4P03905 459 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 C4BPAP04003 597 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 FGF2P09038 288 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR8U9P0C7N5 309 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SULT1A3P0DMM9 295 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SULT1A4P0DMN0 295 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GLULP15104 373 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PBLDP30039 288 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 SDHAP31040 664 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PRSS3P35030 304 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ARL2P36404 184 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GDNFP39905 211 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 AVPR1BP47901 424 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CLDN8P56748 225 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 RPL7AP62424 266 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 SHC2P98077 582 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CDK6Q00534 326 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ACY1Q03154 408 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SERINC3Q13530 473 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LRRC32Q14392 662 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ECM1Q16610 540 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SUPT20HL1Q3ZLR7 823 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 FNDC3BQ53EP0 1204 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 OR2T2Q6IF00 324 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 APOBEC3HQ6NTF7 200 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 LRFN4Q6PJG9 635 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC29A4Q7RTT9 530 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TMCO2Q7Z6W1 182 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 RAVER1Q8IY67 606 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 FAM71E2Q8N5Q1 922 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 FAM181AQ8N9Y4 354 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 NETO2Q8NC67 525 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF738Q8NE65 137 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZMIZ2Q8NF64 920 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR4M1Q8NGD0 313 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GRAPLQ8TC17 118 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 HASPINQ8TF76 798 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 DUSP19Q8WTR2 217 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ARNTL2Q8WYA1 636 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MAL2Q969L2 176 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 EMID1Q96A84 441 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC22A18Q96BI1 424 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MEGF10Q96KG7 1140 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms