RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 CLEC4AQ9UMR7 237 aa18.61■□□□□ 0.57
SDC1-205ENST00000447124 FAF1Q9UNN5 650 aaPredicted RBP18.61■□□□□ 0.57
SDC1-205ENST00000447124 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.61■□□□□ 0.57
SDC1-205ENST00000447124 CASKO14936 926 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 CXCL13O43927 109 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 SCN2BO60939 215 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 GOSR1O95249 250 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 CD8BP10966 210 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 BGNP21810 368 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 SHC1P29353 583 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 SLC1A6P48664 564 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 PHC1P78364 1004 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 ZNF117Q03924 483 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 SMU1Q2TAY7 513 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 OR4F3Q6IEY1 312 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 FAM214BQ7L5A3 538 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 OR5D16Q8NGK9 328 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 PHOSPHO1Q8TCT1 267 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 MBD6Q96DN6 1003 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 ZIM3Q96PE6 472 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 HOXD1Q9GZZ0 328 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 TMEM185BQ9H7F4 350 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 KLHL28Q9NXS3 571 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 NOP53Q9NZM5 478 aaKnown RBP18.6■□□□□ 0.57
SDC1-205ENST00000447124 ICAM5Q9UMF0 924 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 CARD8Q9Y2G2 431 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 RAP2CQ9Y3L5 183 aa18.6■□□□□ 0.57
SDC1-205ENST00000447124 TNFSF11O14788 317 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 ATP6V1C1P21283 382 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 CCKARP32238 428 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 UGT2B10P36537 528 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 RPL14P50914 215 aaKnown RBP18.59■□□□□ 0.57
SDC1-205ENST00000447124 ZNF41P51814 821 aaPredicted RBP18.59■□□□□ 0.57
SDC1-205ENST00000447124 ATP12AP54707 1039 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 RPS26P62854 115 aaKnown RBP18.59■□□□□ 0.57
SDC1-205ENST00000447124 MAD2L1Q13257 205 aaPredicted RBP18.59■□□□□ 0.57
SDC1-205ENST00000447124 TOMM34Q15785 309 aaPredicted RBP18.59■□□□□ 0.57
SDC1-205ENST00000447124 NDUFAF6Q330K2 333 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 CEP85LQ5SZL2 805 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 C6orf120Q7Z4R8 191 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 MTERF4Q7Z6M4 381 aaKnown RBP18.59■□□□□ 0.57
SDC1-205ENST00000447124 TGIF2LYQ8IUE0 185 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 OR2V1Q8NHB1 315 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 OSTF1Q92882 214 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 SDF2Q99470 211 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 PLSCR4Q9NRQ2 329 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 PNPOQ9NVS9 261 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 ELOVL5Q9NYP7 299 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 C6orf203Q9P0P8 240 aaPredicted RBP18.59■□□□□ 0.57
SDC1-205ENST00000447124 STOML1Q9UBI4 398 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 PROCRQ9UNN8 238 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 PRR14LQ5THK1 2151 aa18.59■□□□□ 0.57
SDC1-205ENST00000447124 DEFB108AA8MXU0 73 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 TM9SF1O15321 606 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 RAF1P04049 648 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 MYZAPP0CAP1 466 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 POU2F1P14859 743 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 MATN1P21941 496 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 FOXF1Q12946 379 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 PPP4R4Q6NUP7 873 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 ESPNLQ6ZVH7 1005 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 OLIG3Q7RTU3 272 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 ZNF550Q7Z398 422 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 LILRA2Q8N149 483 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 GPR119Q8TDV5 335 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 MOAP1Q96BY2 351 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 SLC39A3Q9BRY0 314 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 PRRG4Q9BZD6 226 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 CENPHQ9H3R5 247 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 NEUROD4Q9HD90 331 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 KCNK9Q9NPC2 374 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 KCNE5Q9UJ90 142 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 HAO1Q9UJM8 370 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 EDARQ9UNE0 448 aa18.58■□□□□ 0.56
SDC1-205ENST00000447124 ROS1P08922 2347 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 C16orf97H3BN30 126 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 ANKRD28O15084 1053 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 SOX30O94993 753 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 KRT16P08779 473 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 CD99P14209 185 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 NID1P14543 1247 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 P2RX1P51575 399 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 FGFBP1Q14512 234 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 ANKRD34AQ69YU3 496 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 HBMQ6B0K9 141 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 FBXO27Q8NI29 283 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 ALPK1Q96QP1 1244 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 DTNAQ9Y4J8 743 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 VPS13CQ709C8 3753 aa18.57■□□□□ 0.56
SDC1-205ENST00000447124 HEATR5AQ86XA9 2040 aa18.56■□□□□ 0.56
SDC1-205ENST00000447124 ESPNB1AK53 854 aa18.56■□□□□ 0.56
SDC1-205ENST00000447124 RNASET2O00584 256 aaKnown RBP18.56■□□□□ 0.56
SDC1-205ENST00000447124 ZNF195O14628 629 aa18.56■□□□□ 0.56
SDC1-205ENST00000447124 FCMRO60667 390 aa18.56■□□□□ 0.56
SDC1-205ENST00000447124 FCGR2AP12318 317 aa18.56■□□□□ 0.56
SDC1-205ENST00000447124 CD53P19397 219 aa18.56■□□□□ 0.56
SDC1-205ENST00000447124 SOAT1P35610 550 aa18.56■□□□□ 0.56
SDC1-205ENST00000447124 EIF1P41567 113 aaKnown RBP18.56■□□□□ 0.56
SDC1-205ENST00000447124 KCNJ5P48544 419 aa18.56■□□□□ 0.56
SDC1-205ENST00000447124 CASP9P55211 416 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms