RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TINAGQ9UJW2 476 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 ABCG2Q9UNQ0 655 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 ERVK-19Q9WJR5 959 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 IGLV3-12A0A075B6K2 115 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 SYNDIG1LA6NDD5 238 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 C17orf105B2RV13 164 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 RFPL3O75679 317 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 AK1P00568 194 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 TRAPPC2P0DI81 140 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 TRAPPC2BP0DI82 140 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 CCL4P13236 92 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 CD40LGP29965 261 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 KCNJ5P48544 419 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ARHGDIAP52565 204 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 VBP1P61758 197 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 FUT7Q11130 342 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ARHGAP11BQ3KRB8 267 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 EXOSC6Q5RKV6 272 aaKnown RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 TMEM65Q6PI78 240 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 OLIG3Q7RTU3 272 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 EPHX4Q8IUS5 362 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 STRADBQ9C0K7 418 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 VN1R1Q9GZP7 353 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 TRIM45Q9H8W5 580 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF556Q9HAH1 456 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 CACYBPQ9HB71 228 aaKnown RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 C14orf105Q9NVL8 296 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 WDR45Q9Y484 360 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 CLCA3PQ9Y6N3 262 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 WDR87Q6ZQQ6 2873 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 TCRBV16S1A1N1A0A5B0 115 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 LINC00862A6NCI5 91 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 CENPXA8MT69 81 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 HRKO00198 91 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 MEN1O00255 615 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 PDGFAP04085 211 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 IFNW1P05000 195 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ZGLP1P0C6A0 271 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 TNFRSF1BP20333 461 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 AGXTP21549 392 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 GABRA3P34903 492 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 MAP3K8P41279 467 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 OR1E2P47887 323 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 EMDP50402 254 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 DUSP8Q13202 625 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ELAVL1Q15717 326 aaKnown RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF124Q15973 351 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF544Q6NX49 715 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ARSKQ6UWY0 536 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF767PQ75MW2 155 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 OVCH1Q7RTY7 1134 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 LAPTM4BQ86VI4 370 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 LYSMD2Q8IV50 215 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 SVOPLQ8N434 492 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 PIK3C3Q8NEB9 887 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 SENP5Q96HI0 755 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 FBXL20Q96IG2 436 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 BCL7BQ9BQE9 202 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 FOLH1BQ9HBA9 442 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 PARD6AQ9NPB6 346 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 RPRD1BQ9NQG5 326 aaKnown RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 B3GNT2Q9NY97 397 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 IFT80Q9P2H3 777 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 A8MUA0 341 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 B4E171 279 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 G3V2T6 193 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 SOCS2O14508 198 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 GDF9O60383 454 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 DIRAS1O95057 198 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 NKX2-2O95096 273 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ONECUT2O95948 504 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ALPPP05187 535 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF181Q2M3W8 571 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ZFP69Q49AA0 526 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 CYP27C1Q4G0S4 372 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 IQCCQ4KMZ1 466 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 DCST2Q5T1A1 773 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 OTUD3Q5T2D3 398 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF385CQ66K41 422 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 STK32CQ86UX6 486 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 CHDHQ8NE62 594 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 PLPP5Q8NEB5 264 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 GPR32P1Q8NGA4 272 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 PTPMT1Q8WUK0 201 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 HOXB13Q92826 284 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 DAZLQ92904 295 aaKnown RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 FKBP10Q96AY3 582 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 CCDC120Q96HB5 630 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF354BQ96LW1 612 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 SDF2Q99470 211 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 OR10A5Q9H207 317 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 REEP1Q9H902 201 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 MTHFD2LQ9H903 347 aaPredicted RBP7.49□□□□□ -1.21
CCDC39-201ENST00000442201 THSD1Q9NS62 852 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 GLTPQ9NZD2 209 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 NDUFAF4Q9P032 175 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 REV1Q9UBZ9 1251 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 PRODH2Q9UF12 536 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 U3KQV3 271 aa7.49□□□□□ -1.21
CCDC39-201ENST00000442201 DSPPQ9NZW4 1301 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms