RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SLC6A13Q9NSD5 602 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 CLCF1Q9UBD9 225 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 KCNE5Q9UJ90 142 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 MKLN1Q9UL63 735 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 CARD8Q9Y2G2 431 aa21.34■■□□□ 1.01
VARS-217ENST00000440048 H0YC42 278 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 GTPBP1O00178 669 aaKnown RBP21.33■■□□□ 1.01
VARS-217ENST00000440048 HMGN4O00479 90 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 TNFRSF21O75509 655 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 PRF1P14222 555 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 ZNF17P17021 662 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 ZNF41P51814 821 aaPredicted RBP21.33■■□□□ 1.01
VARS-217ENST00000440048 SUCLG1P53597 346 aaKnown RBP21.33■■□□□ 1.01
VARS-217ENST00000440048 TPD52P55327 224 aaPredicted RBP21.33■■□□□ 1.01
VARS-217ENST00000440048 STX1BP61266 288 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 ZNF141Q15928 474 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 NDUFAF6Q330K2 333 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 TIGD2Q4W5G0 525 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 CBLN3Q6UW01 205 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 DNAJC14Q6Y2X3 702 aaPredicted RBP21.33■■□□□ 1.01
VARS-217ENST00000440048 MEX3BQ6ZN04 569 aaKnown RBP21.33■■□□□ 1.01
VARS-217ENST00000440048 GTPBP8Q8N3Z3 284 aaPredicted RBP21.33■■□□□ 1.01
VARS-217ENST00000440048 MEIOBQ8N635 442 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 RELL2Q8NC24 303 aaPredicted RBP21.33■■□□□ 1.01
VARS-217ENST00000440048 SMPDL3BQ92485 455 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 WNT2BQ93097 391 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 VPS33AQ96AX1 596 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 ZBTB8AQ96BR9 441 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 ROPN1LQ96C74 230 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 RMND5AQ9H871 391 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 ZNF629Q9UEG4 869 aaPredicted RBP21.33■■□□□ 1.01
VARS-217ENST00000440048 AP4B1Q9Y6B7 739 aa21.33■■□□□ 1.01
VARS-217ENST00000440048 CENPVL1A0A0U1RR11 272 aa21.32■■□□□ 1
VARS-217ENST00000440048 PRAMEF27A3QJZ7 478 aa21.32■■□□□ 1
VARS-217ENST00000440048 C7orf72A4D263 438 aa21.32■■□□□ 1
VARS-217ENST00000440048 DVL2O14641 736 aa21.32■■□□□ 1
VARS-217ENST00000440048 SEC14L5O43304 696 aa21.32■■□□□ 1
VARS-217ENST00000440048 GUSBP08236 651 aa21.32■■□□□ 1
VARS-217ENST00000440048 IGFBP2P18065 325 aa21.32■■□□□ 1
VARS-217ENST00000440048 BMP5P22003 454 aa21.32■■□□□ 1
VARS-217ENST00000440048 CLDN20P56880 219 aa21.32■■□□□ 1
VARS-217ENST00000440048 TYW3Q6IPR3 259 aaKnown RBP21.32■■□□□ 1
VARS-217ENST00000440048 CHMP1BQ7LBR1 199 aa21.32■■□□□ 1
VARS-217ENST00000440048 MCEMP1Q8IX19 187 aa21.32■■□□□ 1
VARS-217ENST00000440048 PNPT1Q8TCS8 783 aaKnown RBP21.32■■□□□ 1
VARS-217ENST00000440048 ITCHQ96J02 903 aa21.32■■□□□ 1
VARS-217ENST00000440048 TM9SF2Q99805 663 aa21.32■■□□□ 1
VARS-217ENST00000440048 TREX2Q9BQ50 279 aaPredicted RBP21.32■■□□□ 1
VARS-217ENST00000440048 POLE3Q9NRF9 147 aa21.32■■□□□ 1
VARS-217ENST00000440048 ICAM5Q9UMF0 924 aa21.32■■□□□ 1
VARS-217ENST00000440048 WDR45Q9Y484 360 aa21.32■■□□□ 1
VARS-217ENST00000440048 FBN2P35556 2912 aa21.32■■□□□ 1
VARS-217ENST00000440048 SERINC4A6NH21 518 aa21.31■■□□□ 1
VARS-217ENST00000440048 KIAA0513O60268 411 aa21.31■■□□□ 1
VARS-217ENST00000440048 UGT2B17O75795 530 aa21.31■■□□□ 1
VARS-217ENST00000440048 KRT75O95678 551 aa21.31■■□□□ 1
VARS-217ENST00000440048 LINGO3P0C6S8 592 aa21.31■■□□□ 1
VARS-217ENST00000440048 TMIGD3P0DMS9 266 aaPredicted RBP21.31■■□□□ 1
VARS-217ENST00000440048 CTSSP25774 331 aa21.31■■□□□ 1
VARS-217ENST00000440048 PSMA4P25789 261 aaKnown RBP21.31■■□□□ 1
VARS-217ENST00000440048 P2RX1P51575 399 aa21.31■■□□□ 1
VARS-217ENST00000440048 SUMO3P55854 103 aaPredicted RBP21.31■■□□□ 1
VARS-217ENST00000440048 EEFSECP57772 596 aaKnown RBP21.31■■□□□ 1
VARS-217ENST00000440048 TXNL4AP83876 142 aaKnown RBP21.31■■□□□ 1
VARS-217ENST00000440048 COX20Q5RI15 118 aa21.31■■□□□ 1
VARS-217ENST00000440048 AP1ARQ63HQ0 302 aa21.31■■□□□ 1
VARS-217ENST00000440048 GRAMD2AQ8IUY3 354 aa21.31■■□□□ 1
VARS-217ENST00000440048 POC1BQ8TC44 478 aa21.31■■□□□ 1
VARS-217ENST00000440048 ZFP90Q8TF47 636 aa21.31■■□□□ 1
VARS-217ENST00000440048 THOC1Q96FV9 657 aaKnown RBP21.31■■□□□ 1
VARS-217ENST00000440048 RNF145Q96MT1 663 aa21.31■■□□□ 1
VARS-217ENST00000440048 SAP130Q9H0E3 1048 aa21.31■■□□□ 1
VARS-217ENST00000440048 ZNF264O43296 627 aa21.3■■□□□ 1
VARS-217ENST00000440048 EDF1O60869 148 aaKnown RBP21.3■■□□□ 1
VARS-217ENST00000440048 RCBTB2O95199 551 aa21.3■■□□□ 1
VARS-217ENST00000440048 ANP32DO95626 131 aa21.3■■□□□ 1
VARS-217ENST00000440048 NUDT14O95848 222 aa21.3■■□□□ 1
VARS-217ENST00000440048 TGM6O95932 706 aa21.3■■□□□ 1
VARS-217ENST00000440048 ZCCHC18P0CG32 403 aa21.3■■□□□ 1
VARS-217ENST00000440048 UBL4AP11441 157 aa21.3■■□□□ 1
VARS-217ENST00000440048 ANXA11P50995 505 aaKnown RBP21.3■■□□□ 1
VARS-217ENST00000440048 AGFG1P52594 562 aaKnown RBP21.3■■□□□ 1
VARS-217ENST00000440048 MAPK14Q16539 360 aa21.3■■□□□ 1
VARS-217ENST00000440048 GTDC1Q4AE62 458 aa21.3■■□□□ 1
VARS-217ENST00000440048 GPAT3Q53EU6 434 aa21.3■■□□□ 1
VARS-217ENST00000440048 FRRS1Q6ZNA5 592 aa21.3■■□□□ 1
VARS-217ENST00000440048 GGNQ86UU5 652 aa21.3■■□□□ 1
VARS-217ENST00000440048 FUNDC1Q8IVP5 155 aa21.3■■□□□ 1
VARS-217ENST00000440048 TRIM8Q9BZR9 551 aa21.3■■□□□ 1
VARS-217ENST00000440048 EIF4E2O60573 245 aaKnown RBP21.29■■□□□ 1
VARS-217ENST00000440048 IL18BPO95998 194 aa21.29■■□□□ 1
VARS-217ENST00000440048 OPRM1P35372 400 aa21.29■■□□□ 1
VARS-217ENST00000440048 CHRNEQ04844 493 aa21.29■■□□□ 1
VARS-217ENST00000440048 FOXF2Q12947 444 aa21.29■■□□□ 1
VARS-217ENST00000440048 SYPL1Q16563 259 aa21.29■■□□□ 1
VARS-217ENST00000440048 C6orf10Q5SRN2 563 aa21.29■■□□□ 1
VARS-217ENST00000440048 GDF7Q7Z4P5 450 aa21.29■■□□□ 1
VARS-217ENST00000440048 ZNF295-AS1Q8N0V1 137 aa21.29■■□□□ 1
VARS-217ENST00000440048 ZNF619Q8N2I2 560 aa21.29■■□□□ 1
VARS-217ENST00000440048 ANKFN1Q8N957 763 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms