RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 DCSTAMPQ9H295 470 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 KLHL31Q9H511 634 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF226Q9NYT6 803 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 TP53TG5Q9Y2B4 290 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 SLC9A8Q9Y2E8 581 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 CSAG2Q9Y5P2 127 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF407Q9C0G0 2248 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TMEM8BA6NDV4 472 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 AGAP5A6NIR3 686 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TTLL8A6PVC2 850 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 B4E171 279 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 CCRL2O00421 344 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 SCG5P05408 212 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 KLK1P06870 262 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 H1F0P07305 194 aaKnown RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 ADORA3P0DMS8 318 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 NTSP30990 170 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 IFNA8P32881 189 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 S100A5P33763 92 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 IDUAP35475 653 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 BCL6P41182 706 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TSPAN7P41732 249 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 RGS6P49758 472 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 CLK1P49759 484 aaKnown RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 CRISP3P54108 245 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 DEFA1P59665 94 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 DEFA3P59666 94 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 ACSM1Q08AH1 577 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 MLLT11Q13015 90 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TBR1Q16650 682 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 ZSWIM7Q19AV6 140 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 KLHL22Q53GT1 634 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 DCST1Q5T197 706 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 OR4C11Q6IEV9 310 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 MRM1Q6IN84 353 aaKnown RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 LANCL3Q6ZV70 420 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 PRSS42Q7Z5A4 293 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 RNF130Q86XS8 419 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TAGAPQ8N103 731 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 OR9Q1Q8NGQ5 310 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 MCFD2Q8NI22 146 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 FLVCR1-AS1Q8TAF5 88 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 NUDT8Q8WV74 236 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 OIT3Q8WWZ8 545 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 PRRC1Q96M27 445 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 BARD1Q99728 777 aaKnown RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 CRB3Q9BUF7 120 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 DPH1Q9BZG8 443 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 FGF20Q9NP95 211 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 SIRT3Q9NTG7 399 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 PTGFRNQ9P2B2 879 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 EPHA6Q9UF33 1036 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 SH3BGRL2Q9UJC5 107 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TCFL5Q9UL49 500 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 PLCL2Q9UPR0 1127 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 NUP214P35658 2090 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 IQCMA0A1B0GVH7 501 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 M0R082 166 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 PRICKLE3O43900 615 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 PRKRAO75569 313 aaKnown RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 FADS2O95864 444 aaKnown RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 PDGFAP04085 211 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 STSP08842 583 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 NUDT7P0C024 238 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF888P0CJ79 500 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TRAPPC2P0DI81 140 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TRAPPC2BP0DI82 140 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 CFL1P23528 166 aaKnown RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 MANFP55145 182 aaKnown RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 CDH12P55289 794 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 C1DQ13901 141 aaKnown RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 PTGES3Q15185 160 aaKnown RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 INAQ16352 499 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 COX20Q5RI15 118 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 C1orf94Q6P1W5 598 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 KLHL17Q6TDP4 642 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 PCSK4Q6UW60 755 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 AHSA2Q719I0 299 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 OR4N5Q8IXE1 308 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TEX19Q8NA77 164 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 FDCSPQ8NFU4 85 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 NT5CQ8TCD5 201 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 STT3BQ8TCJ2 826 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 CREB3L4Q8TEY5 395 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 SLC38A5Q8WUX1 472 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 SLC35B4Q969S0 331 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TMEM80Q96HE8 168 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 SLC35G5Q96KT7 338 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 KCNC2Q96PR1 638 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 C17orf62Q9BQA9 187 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 DDA1Q9BW61 102 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TEX12Q9BXU0 123 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 FAM117AQ9C073 453 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 TSPAN10Q9H1Z9 355 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 CXorf36Q9H7Y0 433 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 NMNAT1Q9HAN9 279 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 KRCC1Q9NPI7 259 aaPredicted RBP4.41□□□□□ -1.7
EDEM3-203ENST00000439962 PLA2G3Q9NZ20 509 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 REV1Q9UBZ9 1251 aa4.41□□□□□ -1.7
EDEM3-203ENST00000439962 DAPK2Q9UIK4 370 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms