RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 C1QTNF8P60827 252 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 GSG1Q2KHT4 349 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 QRICH1Q2TAL8 776 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 NADK2Q4G0N4 442 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 OR8G2PQ6IF36 304 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 SCYL2Q6P3W7 929 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 PAMR1Q6UXH9 720 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 Q6ZR54 194 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 MARCH9Q86YJ5 346 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 HSCBQ8IWL3 235 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 ZSCAN4Q8NAM6 433 aaPredicted RBP2.6□□□□□ -1.99
VPS41-207ENST00000439468 OR10T2Q8NGX3 314 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 TFB1MQ8WVM0 346 aaKnown RBP2.6□□□□□ -1.99
VPS41-207ENST00000439468 TRUB1Q8WWH5 349 aaKnown RBP2.6□□□□□ -1.99
VPS41-207ENST00000439468 THRSPQ92748 146 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 PSMG2Q969U7 264 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 TTC25Q96NG3 672 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 OR5M11Q96RB7 305 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 ERP44Q9BS26 406 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 RAB33BQ9H082 229 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 PNO1Q9NRX1 252 aaKnown RBP2.6□□□□□ -1.99
VPS41-207ENST00000439468 RNF6Q9Y252 685 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 EIF3LQ9Y262 564 aaKnown RBP2.6□□□□□ -1.99
VPS41-207ENST00000439468 USP16Q9Y5T5 823 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 NEURL4Q96JN8 1562 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 ADGBQ8N7X0 1667 aa2.6□□□□□ -1.99
VPS41-207ENST00000439468 FANCAO15360 1455 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 TCOF1Q13428 1488 aaKnown RBP2.59□□□□□ -1.99
VPS41-207ENST00000439468 SHANK2Q9UPX8 1470 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 SYNMO15061 1565 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 KDM5CP41229 1560 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 FAM168BA1KXE4 195 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 A8MU10 97 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 FAM220BPB1ANY3 271 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 H3BMQ9 156 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 XPO1O14980 1071 aaKnown RBP2.59□□□□□ -1.99
VPS41-207ENST00000439468 CTAGE5O15320 804 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 NUDT21O43809 227 aaKnown RBP2.59□□□□□ -1.99
VPS41-207ENST00000439468 NOL3O60936 208 aaKnown RBP2.59□□□□□ -1.99
VPS41-207ENST00000439468 OPN1LWP04000 364 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 HBQ1P09105 142 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 CPN1P15169 458 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 KLK2P20151 261 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 HNRNPA2B1P22626 353 aaKnown RBP2.59□□□□□ -1.99
VPS41-207ENST00000439468 ATP5A1P25705 553 aaKnown RBP2.59□□□□□ -1.99
VPS41-207ENST00000439468 ADSSP30520 456 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 GNPDA1P46926 289 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 STARP49675 285 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 KRTAP12-2P59991 146 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 VLDLRP98155 873 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 CUL1Q13616 776 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 ATXN7L3Q14CW9 347 aaPredicted RBP2.59□□□□□ -1.99
VPS41-207ENST00000439468 TIGITQ495A1 244 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 GLYR1Q49A26 553 aaPredicted RBP2.59□□□□□ -1.99
VPS41-207ENST00000439468 GGTA1PQ4G0N0 100 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 TEX44Q53QW1 395 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 RABGAP1LQ5R372 815 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 SLC22A10Q63ZE4 541 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 PYHIN1Q6K0P9 492 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 ACSM5Q6NUN0 579 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 ANKRD37Q7Z713 158 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 IFNEQ86WN2 208 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 ZNF677Q86XU0 584 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 ZDHHC21Q8IVQ6 265 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 SLC38A6Q8IZM9 456 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 LRRC43Q8N309 656 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 ZNF540Q8NDQ6 660 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 DENND6BQ8NEG7 585 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 IPMKQ8NFU5 416 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 PNPT1Q8TCS8 783 aaKnown RBP2.59□□□□□ -1.99
VPS41-207ENST00000439468 MRAPQ8TCY5 172 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 DEFB126Q9BYW3 111 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 COG4Q9H9E3 785 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 ELOVL3Q9HB03 270 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 MRPL39Q9NYK5 338 aaKnown RBP2.59□□□□□ -1.99
VPS41-207ENST00000439468 EHFQ9NZC4 300 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 CRLS1Q9UJA2 301 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 VSIG4Q9Y279 399 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 GSTK1Q9Y2Q3 226 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 PPIAL4AQ9Y536 164 aa2.59□□□□□ -1.99
VPS41-207ENST00000439468 ANKRD30BQ9BXX2 1392 aa2.59□□□□□ -2
VPS41-207ENST00000439468 ABCA7Q8IZY2 2146 aa2.59□□□□□ -2
VPS41-207ENST00000439468 PTPRKQ15262 1439 aa2.59□□□□□ -2
VPS41-207ENST00000439468 WDR7Q9Y4E6 1490 aa2.58□□□□□ -2
VPS41-207ENST00000439468 TOP2AP11388 1531 aaKnown RBP2.58□□□□□ -2
VPS41-207ENST00000439468 ABCA8O94911 1581 aa2.58□□□□□ -2
VPS41-207ENST00000439468 MYO3AQ8NEV4 1616 aa2.58□□□□□ -2
VPS41-207ENST00000439468 ROBO1Q9Y6N7 1651 aa2.58□□□□□ -2
VPS41-207ENST00000439468 OR6C65A6NJZ3 312 aa2.58□□□□□ -2
VPS41-207ENST00000439468 NDC80O14777 642 aa2.58□□□□□ -2
VPS41-207ENST00000439468 ZSCAN12O43309 604 aa2.58□□□□□ -2
VPS41-207ENST00000439468 TOM1O60784 492 aa2.58□□□□□ -2
VPS41-207ENST00000439468 CA1P00915 261 aaPredicted RBP2.58□□□□□ -2
VPS41-207ENST00000439468 PTMAP06454 111 aaKnown RBP2.58□□□□□ -2
VPS41-207ENST00000439468 CCDC166P0CW27 439 aa2.58□□□□□ -2
VPS41-207ENST00000439468 H2AFXP16104 143 aaPredicted RBP2.58□□□□□ -2
VPS41-207ENST00000439468 HTR2AP28223 471 aa2.58□□□□□ -2
VPS41-207ENST00000439468 ACADVLP49748 655 aa2.58□□□□□ -2
VPS41-207ENST00000439468 RGS4P49798 205 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms