RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 SCO2O43819 266 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 ZIC3O60481 467 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 CBR3O75828 277 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 KRT75O95678 551 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 IL33O95760 270 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 OR12D1P0DN82 309 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 COX4I1P13073 169 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 BMP5P22003 454 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 IL12BP29460 328 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 KRT20P35900 424 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 KHKP50053 298 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 POU6F2P78424 691 aaPredicted RBP15.35■□□□□ 0.05
UBE3D-204ENST00000430071 SRYQ05066 204 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 NFYCQ13952 458 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 DECR1Q16698 335 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.35■□□□□ 0.05
UBE3D-204ENST00000430071 FIGNL1Q6PIW4 674 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 ZAR1Q86SH2 424 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 PLCZ1Q86YW0 608 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 C9orf106Q8NAJ2 232 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 OR14L1PQ8NHC6 308 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 BCAS4Q8TDM0 211 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 RAB8BQ92930 207 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 TUBA1CQ9BQE3 449 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 MCCC2Q9HCC0 563 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 ITGB1BP2Q9UKP3 347 aa15.35■□□□□ 0.05
UBE3D-204ENST00000430071 FREM1Q5H8C1 2179 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 BBIP1A8MTZ0 92 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 HMGN4O00479 90 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 MRASO14807 208 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 FADS1O60427 444 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 DCTN3O75935 186 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 ETFAP13804 333 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 RFX3P48380 749 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 GFRA1P56159 465 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 FUT5Q11128 374 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 COQ5Q5HYK3 327 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 DCST2Q5T1A1 773 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 NSUN5P2Q63ZY6 315 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 APOOLQ6UXV4 268 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 RP9Q8TA86 221 aaKnown RBP15.34■□□□□ 0.05
UBE3D-204ENST00000430071 XAGE5Q8WWM1 108 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 NRGNQ92686 78 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 RCN3Q96D15 328 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 LRRC37BQ96QE4 947 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 CGREF1Q99674 301 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 CPPED1Q9BRF8 314 aaPredicted RBP15.34■□□□□ 0.05
UBE3D-204ENST00000430071 DSN1Q9H410 356 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 IKZF5Q9H5V7 419 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.34■□□□□ 0.05
UBE3D-204ENST00000430071 RPH3AQ9Y2J0 694 aaPredicted RBP15.34■□□□□ 0.05
UBE3D-204ENST00000430071 L3MBTL1Q9Y468 752 aa15.34■□□□□ 0.05
UBE3D-204ENST00000430071 PRAMEF27A3QJZ7 478 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 DUXAA6NLW8 204 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 FXYD1O00168 92 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 ABCB7O75027 752 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 POU3F2P20265 443 aaPredicted RBP15.33■□□□□ 0.04
UBE3D-204ENST00000430071 EVI2BP34910 448 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 TIMP3P35625 211 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 B3GALT5-AS1P59052 145 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 FOXF2Q12947 444 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 STX5Q13190 355 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 EFR3AQ14156 821 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 CAPRIN1Q14444 709 aaKnown RBP15.33■□□□□ 0.04
UBE3D-204ENST00000430071 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.33■□□□□ 0.04
UBE3D-204ENST00000430071 TRMT5Q32P41 509 aaKnown RBP15.33■□□□□ 0.04
UBE3D-204ENST00000430071 SLC25A35Q3KQZ1 300 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 MMEL1Q495T6 779 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 RUNDC3AQ59EK9 446 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 HEPHL1Q6MZM0 1159 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 OLIG3Q7RTU3 272 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 LACC1Q8IV20 430 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 C10orf111Q8N326 155 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 CHDHQ8NE62 594 aaPredicted RBP15.33■□□□□ 0.04
UBE3D-204ENST00000430071 SLC39A3Q9BRY0 314 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 TAS2R10Q9NYW0 307 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 MED11Q9P086 117 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 GMEB1Q9Y692 573 aa15.33■□□□□ 0.04
UBE3D-204ENST00000430071 ITPR3Q14573 2671 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 HSPB2A8KAH6 182 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 SOX30O94993 753 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 ACTL6AO96019 429 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 CPN1P15169 458 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 SRD5A2P31213 254 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 CRATP43155 626 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 MAGEA8P43361 318 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 LHX2P50458 406 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 SELPLGQ14242 412 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 RGNQ15493 299 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 HSPB2Q16082 182 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 FAM91A1Q658Y4 838 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 MARCH3Q86UD3 253 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 PM20D2Q8IYS1 436 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 FITM2Q8N6M3 262 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 OR2M3Q8NG83 312 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 OR5M1Q8NGP8 315 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 ANKRD27Q96NW4 1050 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 SDF2Q99470 211 aa15.32■□□□□ 0.04
UBE3D-204ENST00000430071 MRTO4Q9UKD2 239 aaKnown RBP15.32■□□□□ 0.04
UBE3D-204ENST00000430071 MBD3L4A6NDZ8 208 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms