RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 PARK7Q99497 189 aaKnown RBP5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 CDCA3Q99618 268 aaPredicted RBP5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 C19orf43Q9BQ61 176 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 WDR77Q9BQA1 342 aaPredicted RBP5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 SORBS1Q9BX66 1292 aaKnown RBP5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 GAL3ST2Q9H3Q3 398 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 SMDT1Q9H4I9 107 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 NOX3Q9HBY0 568 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 UQCC1Q9NVA1 299 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 RBM22Q9NW64 420 aaKnown RBP eCLIP5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 TAS2R10Q9NYW0 307 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 H2AFY2Q9P0M6 372 aaPredicted RBP5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 KLHL42Q9P2K6 505 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 TESQ9UGI8 421 aaKnown RBP5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 POLLQ9UGP5 575 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 EVLQ9UI08 416 aaPredicted RBP5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 KCND3Q9UK17 655 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 UTS2RQ9UKP6 389 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZMIZ1Q9ULJ6 1067 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 JAG2Q9Y219 1238 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 SF3B6Q9Y3B4 125 aaKnown RBP5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 V9GYS6 101 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 ANKRD36A6QL64 1941 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 TBC1D3DA0A087WVF3 549 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 TBC1D3IA0A087WXS9 549 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 TBC1D3EA0A087X179 549 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 TBC1D3KA0A087X1G2 549 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 GNG14A0A1W2PPG7 69 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 GXYLT2A0PJZ3 443 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 MEX3AA1L020 520 aaKnown RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 CDHR4A6H8M9 788 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 LRIT2A6NDA9 550 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 NPEPPSL1A6NEC2 478 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 TBC1D3FA6NER0 549 aaPredicted RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 POM121BA6NF01 834 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 POM121CA8CG34 1229 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 TBC1D3LB9A6J9 549 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 HSBP1L1C9JCN9 74 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZNF587BE7ETH6 402 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 MANBAO00462 879 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 ARPC1BO15143 372 aaKnown RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 FLRT2O43155 660 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 FGF16O43320 207 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 PRKRAO75569 313 aaKnown RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 UBXN7O94888 489 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 ABLIM3O94929 683 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 ARIH2O95376 493 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 CLDN9O95484 217 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 RECKO95980 971 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 OPN1LWP04000 364 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 GBAP04062 536 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 ATP1B1P05026 303 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 ANXA5P08758 320 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 USP17L7P0C7H9 530 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 PKMP14618 531 aaKnown RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 MYOGP15173 224 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 ARSAP15289 507 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 HOXB9P17482 250 aaPredicted RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 BMP7P18075 431 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 TYMPP19971 482 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 RAB5AP20339 215 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 DGKAP23743 735 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 PPP2R1BP30154 601 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 CCR1P32246 355 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 RPL4P36578 427 aaKnown RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 GDNFP39905 211 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 TNFSF9P41273 254 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 CD86P42081 329 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 PTGER3P43115 390 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 LIMS1P48059 325 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 NDUFV1P49821 464 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 TAF6P49848 677 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 SELENOPP49908 381 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 PPT1P50897 306 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 CCR4P51679 360 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 EPHB3P54753 998 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 CDH11P55287 796 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 ERVPABLB-1P60509 514 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 OSTNP61366 133 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 RAP1AP62834 184 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 NKX6-1P78426 367 aaPredicted RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 CYCSP99999 105 aaKnown RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 NRG1Q02297 640 aaPredicted RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 PJVKQ0ZLH3 352 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 TWF1Q12792 350 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 AIMP2Q13155 320 aaKnown RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 ALKBH1Q13686 389 aaKnown RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 DDX39BQ13838 428 aaKnown RBP5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 DHCR24Q15392 516 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 PTCHD3Q3KNS1 767 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 SLC36A2Q495M3 483 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 GXYLT1Q4G148 440 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 RAB6CQ53S08 254 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 SYT14P1Q58G82 188 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 ACER2Q5QJU3 275 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 MARCH8Q5T0T0 291 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 ARHGAP40Q5TG30 622 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 MARC1Q5VT66 337 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 NSUN5P2Q63ZY6 315 aa5.25□□□□□ -1.57
VTI1BP4-201ENST00000427516 ANKRD34AQ69YU3 496 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms