RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 CRNKL1Q9BZJ0 848 aaKnown RBP1.83□□□□□ -2.12
PTPRC-208ENST00000427110 IKZF5Q9H5V7 419 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 COQ10BQ9H8M1 238 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 COG4Q9H9E3 785 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 PNO1Q9NRX1 252 aaKnown RBP1.83□□□□□ -2.12
PTPRC-208ENST00000427110 TNFRSF19Q9NS68 423 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.83□□□□□ -2.12
PTPRC-208ENST00000427110 EHFQ9NZC4 300 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 CLEC4EQ9ULY5 219 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 DUSP12Q9UNI6 340 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 PPIAL4AQ9Y536 164 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 FLVCR1Q9Y5Y0 555 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 ADAMTS9Q9P2N4 1935 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 TET3O43151 1660 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 IQGAP1P46940 1657 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 ROCK2O75116 1388 aaKnown RBP1.83□□□□□ -2.12
PTPRC-208ENST00000427110 PARD3Q8TEW0 1356 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 RTEL1-TNFRSF6BF6WH68 1400 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 PLCH2O75038 1416 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 ERBINQ96RT1 1412 aa1.83□□□□□ -2.12
PTPRC-208ENST00000427110 WDR7Q9Y4E6 1490 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 PRDM15P57071 1507 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 ZMYM4Q5VZL5 1548 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 SYCP2Q9BX26 1530 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 ERCC6L2Q5T890 1561 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 VWDEQ8N2E2 1590 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 INO80Q9ULG1 1556 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 KLF18A0A0U1RQI7 1052 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 OR6C65A6NJZ3 312 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 K7EPI3 171 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 STX7O15400 261 aaKnown RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 NOL3O60936 208 aaKnown RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 PCCBP05166 539 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 CD55P08174 381 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 HBQ1P09105 142 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 TSPY4P0CV99 314 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 TSPY10P0CW01 314 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 EPB41P11171 864 aaKnown RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 KRTAP5-9P26371 169 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 HPDP32754 393 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 CDH5P33151 784 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 UGT1A3P35503 534 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 MDH1P40925 334 aaKnown RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 OR3A4PP47883 348 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 P2RY4P51582 365 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 ERVPABLB-1P60509 514 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 RND3P61587 244 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 RPL32P62910 135 aaKnown RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 RPL8P62917 257 aaKnown RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 ZNF154Q13106 437 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 OLFML2AQ68BL7 652 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 ASPHD2Q6ICH7 369 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 ACSM5Q6NUN0 579 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 BLOC1S2Q6QNY1 142 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 CBLN3Q6UW01 205 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 TMEM184AQ6ZMB5 413 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 CYS1Q717R9 158 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 TMEM17Q86X19 198 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 APOBEC3FQ8IUX4 373 aaKnown RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 ZNF584Q8IVC4 421 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 HSCBQ8IWL3 235 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 C11orf53Q8IXP5 236 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 OR10T2Q8NGX3 314 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 M1APQ8TC57 530 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 IL1F10Q8WWZ1 152 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 PSMG2Q969U7 264 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 SYAP1Q96A49 352 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 TMEM80Q96HE8 168 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 VSIG2Q96IQ7 327 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 KIR2DL4Q99706 377 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 SLC30A2Q9BRI3 323 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 FEM1AQ9BSK4 669 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 RHOJQ9H4E5 214 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 LIN28AQ9H9Z2 209 aaKnown RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 FARSBQ9NSD9 589 aaKnown RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 PRR34Q9NV39 138 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 MRPL39Q9NYK5 338 aaKnown RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 XPO7Q9UIA9 1087 aaKnown RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 KLHL21Q9UJP4 597 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 B9D1Q9UPM9 204 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 RNF6Q9Y252 685 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 GMPPBQ9Y5P6 360 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 MAD1L1Q9Y6D9 718 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 INSRP06213 1382 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 KTN1Q86UP2 1357 aaKnown RBP1.82□□□□□ -2.12
PTPRC-208ENST00000427110 KIDINS220Q9ULH0 1771 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 PLA2R1Q13018 1463 aa1.82□□□□□ -2.12
PTPRC-208ENST00000427110 ARHGAP5Q13017 1502 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 CFAP74Q9C0B2 1584 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 MADDQ8WXG6 1647 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 IGLV8-61A0A075B6I0 122 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 SMIM28A0A1B0GU29 152 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 GSAPA4D1B5 854 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 DHRS7CA6NNS2 312 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 A8MUI8 341 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 CLDN5O00501 218 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 FCN1O00602 326 aa1.81□□□□□ -2.12
PTPRC-208ENST00000427110 NUDT21O43809 227 aaKnown RBP1.81□□□□□ -2.12
PTPRC-208ENST00000427110 IDH1O75874 414 aaKnown RBP1.81□□□□□ -2.12
PTPRC-208ENST00000427110 MFN2O95140 757 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms