RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 ETV2O00321 342 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-205ENST00000423941 HNRNPCL1O60812 293 aaKnown RBP16.72■□□□□ 0.27
HDAC6-205ENST00000423941 LDLRP01130 860 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 TPOP07202 933 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 HOXD4P09016 255 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-205ENST00000423941 LINGO3P0C6S8 592 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 HNRNPCL4P0DMR1 293 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 PSMA4P25789 261 aaKnown RBP16.72■□□□□ 0.27
HDAC6-205ENST00000423941 GZMMP51124 257 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 CRISP3P54108 245 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 KCNJ10P78508 379 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 SKP2Q13309 424 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 GNA13Q14344 377 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 BCL2A1Q16548 175 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 WLSQ5T9L3 541 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 REP15Q6BDI9 236 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 NANOGP8Q6NSW7 305 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 ARSKQ6UWY0 536 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 NET1Q7Z628 596 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-205ENST00000423941 CD163Q86VB7 1156 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 IFNEQ86WN2 208 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 CMIPQ8IY22 773 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 OR14L1PQ8NHC6 308 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 GPR119Q8TDV5 335 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 PHF10Q8WUB8 498 aaKnown RBP16.72■□□□□ 0.27
HDAC6-205ENST00000423941 ABTB1Q969K4 478 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-205ENST00000423941 ZNF524Q96C55 264 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 LRRC58Q96CX6 371 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 WDYHV1Q96HA8 205 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 CCT8L2Q96SF2 557 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 LAT2Q9GZY6 243 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 QRSL1Q9H0R6 528 aaKnown RBP16.72■□□□□ 0.27
HDAC6-205ENST00000423941 TP63Q9H3D4 680 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-205ENST00000423941 EXO5Q9H790 373 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 KAT8Q9H7Z6 458 aaKnown RBP16.72■□□□□ 0.27
HDAC6-205ENST00000423941 NANOGQ9H9S0 305 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-205ENST00000423941 TNFRSF10DQ9UBN6 386 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-205ENST00000423941 ACAD8Q9UKU7 415 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 SLC35A3Q9Y2D2 325 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 CARD8Q9Y2G2 431 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 ARL2BPQ9Y2Y0 163 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 MEMO1Q9Y316 297 aa16.72■□□□□ 0.27
HDAC6-205ENST00000423941 AHRRA9YTQ3 701 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 CCL21O00585 134 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 MRASO14807 208 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 HCRTR2O43614 444 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 WDR1O75083 606 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 PGM3O95394 542 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 BCHEP06276 602 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 UBL4AP11441 157 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 COX4I1P13073 169 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 LHX2P50458 406 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 CASP6P55212 293 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 DLX5P56178 289 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 SELPLGQ14242 412 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 PLPPR5Q32ZL2 321 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 SLC25A53Q5H9E4 307 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 DCST1Q5T197 706 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 RTL6Q6ICC9 239 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 EIF3MQ7L2H7 374 aaKnown RBP16.71■□□□□ 0.27
HDAC6-205ENST00000423941 PTOV1Q86YD1 416 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 OR5W2Q8NH69 310 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 MAL2Q969L2 176 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 TMEM19Q96HH6 336 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 RSPO3Q9BXY4 272 aaPredicted RBP16.71■□□□□ 0.27
HDAC6-205ENST00000423941 EXOSC3Q9NQT5 275 aaKnown RBP16.71■□□□□ 0.27
HDAC6-205ENST00000423941 MED17Q9NVC6 651 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 DKKL1Q9UK85 242 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 COL12A1Q99715 3063 aa16.71■□□□□ 0.27
HDAC6-205ENST00000423941 C15orf38-AP3S2A0A0A6YYH1 394 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 OR2M5A3KFT3 312 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 GTPBP1O00178 669 aaKnown RBP16.7■□□□□ 0.26
HDAC6-205ENST00000423941 BCAS1O75363 584 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-205ENST00000423941 NTN1O95631 604 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 FAM107AO95990 144 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 CSTAP01040 98 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 DBIP07108 87 aaKnown RBP16.7■□□□□ 0.26
HDAC6-205ENST00000423941 NID1P14543 1247 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 GABRA1P14867 456 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 ETS2P15036 469 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 HK1P19367 917 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 HPCAP84074 193 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 NDUFAF6Q330K2 333 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 FAM91A1Q658Y4 838 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 C8orf82Q6P1X6 216 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-205ENST00000423941 AAGABQ6PD74 315 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 FJX1Q86VR8 437 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 PM20D2Q8IYS1 436 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 ULK2Q8IYT8 1036 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 GTPBP8Q8N3Z3 284 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-205ENST00000423941 PCYOX1LQ8NBM8 494 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 OR8J3Q8NGG0 315 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 ZBTB8AQ96BR9 441 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 SH3YL1Q96HL8 342 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-205ENST00000423941 NPAS1Q99742 590 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 PRDM4Q9UKN5 801 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 CHST2Q9Y4C5 530 aa16.7■□□□□ 0.26
HDAC6-205ENST00000423941 FAM215AQ9Y5M1 114 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms