RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 ZNF550Q7Z398 422 aa18.25■□□□□ 0.51
MCF2L-212ENST00000420013 GTF2IRD2Q86UP8 949 aa18.25■□□□□ 0.51
MCF2L-212ENST00000420013 STK32CQ86UX6 486 aa18.25■□□□□ 0.51
MCF2L-212ENST00000420013 FNDC5Q8NAU1 212 aa18.25■□□□□ 0.51
MCF2L-212ENST00000420013 OR7A2PQ8NGA2 310 aa18.25■□□□□ 0.51
MCF2L-212ENST00000420013 PPP1R14CQ8TAE6 165 aa18.25■□□□□ 0.51
MCF2L-212ENST00000420013 TCP10LQ8TDR4 215 aa18.25■□□□□ 0.51
MCF2L-212ENST00000420013 CDS1Q92903 461 aa18.25■□□□□ 0.51
MCF2L-212ENST00000420013 CHMP6Q96FZ7 201 aa18.25■□□□□ 0.51
MCF2L-212ENST00000420013 C16orf58Q96GQ5 468 aa18.25■□□□□ 0.51
MCF2L-212ENST00000420013 ZIM3Q96PE6 472 aa18.25■□□□□ 0.51
MCF2L-212ENST00000420013 FAF1Q9UNN5 650 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-212ENST00000420013 ACTL7BQ9Y614 415 aa18.25■□□□□ 0.51
MCF2L-212ENST00000420013 FAM171A2A8MVW0 826 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 TNFSF11O14788 317 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 CXCL13O43927 109 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 SMPD2O60906 423 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 PEX11AO75192 247 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 SLU7O95391 586 aaKnown RBP18.24■□□□□ 0.51
MCF2L-212ENST00000420013 TUBBP07437 444 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 LINGO3P0C6S8 592 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 PRPS1L1P21108 318 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 CCT3P49368 545 aaKnown RBP18.24■□□□□ 0.51
MCF2L-212ENST00000420013 C21orf58P58505 322 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 PTGR1Q14914 329 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 ACKR1Q16570 336 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 ZNF239Q16600 458 aaKnown RBP18.24■□□□□ 0.51
MCF2L-212ENST00000420013 C6orf136Q5SQH8 315 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 DCST2Q5T1A1 773 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 HBMQ6B0K9 141 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 BHLHB9Q6PI77 547 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 ZCCHC23Q6ZST2 131 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 BEND4Q6ZU67 534 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 ADAMTS15Q8TE58 950 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 CPNE4Q96A23 557 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-212ENST00000420013 OTUB1Q96FW1 271 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-212ENST00000420013 CCL19Q99731 98 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 KLHL4Q9C0H6 718 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 BHLHE41Q9C0J9 482 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-212ENST00000420013 SNX8Q9Y5X2 465 aa18.24■□□□□ 0.51
MCF2L-212ENST00000420013 GPC6Q9Y625 555 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-212ENST00000420013 GJE1A6NN92 205 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 LAMP1P11279 417 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 HOXB4P17483 251 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-212ENST00000420013 EFNA1P20827 205 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-212ENST00000420013 AGTR1P30556 359 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 P2RX1P51575 399 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 NR1H2P55055 460 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 ZNF117Q03924 483 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 FOXF1Q12946 379 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 TP53BP2Q13625 1128 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 SPDYE7PQ495Y7 208 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 Q5PR19 223 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 PRSS57Q6UWY2 283 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 P3H2Q8IVL5 708 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 POC1BQ8TC44 478 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 PHOSPHO1Q8TCT1 267 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 RNF128Q8TEB7 428 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 AENQ8WTP8 325 aaKnown RBP18.23■□□□□ 0.51
MCF2L-212ENST00000420013 COQ8BQ96D53 544 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 NPAS1Q99742 590 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 C1orf50Q9BV19 199 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 CXorf36Q9H7Y0 433 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 UBTD1Q9HAC8 227 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 GP6Q9HCN6 339 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 TIGARQ9NQ88 270 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 GPATCH2Q9NW75 528 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 FBXO34Q9NWN3 711 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 GIMAP2Q9UG22 337 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.23■□□□□ 0.51
MCF2L-212ENST00000420013 CLEC4AQ9UMR7 237 aa18.23■□□□□ 0.51
MCF2L-212ENST00000420013 V9GYY5 206 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-212ENST00000420013 A0A0J9YW62 118 aa18.22■□□□□ 0.51
MCF2L-212ENST00000420013 TMCC2O75069 709 aa18.22■□□□□ 0.51
MCF2L-212ENST00000420013 SKAP2O75563 359 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-212ENST00000420013 AK1P00568 194 aa18.22■□□□□ 0.51
MCF2L-212ENST00000420013 INHBBP09529 407 aa18.22■□□□□ 0.51
MCF2L-212ENST00000420013 PSMB1P20618 241 aaKnown RBP18.22■□□□□ 0.51
MCF2L-212ENST00000420013 LOXP28300 417 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-212ENST00000420013 ADSLP30566 484 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-212ENST00000420013 RNPS1Q15287 305 aaKnown RBP18.22■□□□□ 0.51
MCF2L-212ENST00000420013 EXOC3L2Q2M3D2 409 aa18.22■□□□□ 0.51
MCF2L-212ENST00000420013 SMU1Q2TAY7 513 aa18.22■□□□□ 0.51
MCF2L-212ENST00000420013 KLHL26Q53HC5 615 aa18.22■□□□□ 0.51
MCF2L-212ENST00000420013 STAC2Q6ZMT1 411 aa18.22■□□□□ 0.51
MCF2L-212ENST00000420013 REXO5Q96IC2 774 aaKnown RBP18.22■□□□□ 0.51
MCF2L-212ENST00000420013 TMEM185BQ9H7F4 350 aa18.22■□□□□ 0.51
MCF2L-212ENST00000420013 ASIC5Q9NY37 505 aa18.22■□□□□ 0.51
MCF2L-212ENST00000420013 ZNF500O60304 480 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-212ENST00000420013 NUDT14O95848 222 aa18.21■□□□□ 0.51
MCF2L-212ENST00000420013 C6orf47O95873 294 aa18.21■□□□□ 0.51
MCF2L-212ENST00000420013 BPGMP07738 259 aa18.21■□□□□ 0.51
MCF2L-212ENST00000420013 NID1P14543 1247 aa18.21■□□□□ 0.51
MCF2L-212ENST00000420013 ATP12AP54707 1039 aa18.21■□□□□ 0.51
MCF2L-212ENST00000420013 SELENBP1Q13228 472 aa18.21■□□□□ 0.51
MCF2L-212ENST00000420013 KRT71Q3SY84 523 aa18.21■□□□□ 0.51
MCF2L-212ENST00000420013 IL23RQ5VWK5 629 aa18.21■□□□□ 0.51
MCF2L-212ENST00000420013 RIMKLAQ8IXN7 391 aa18.21■□□□□ 0.51
MCF2L-212ENST00000420013 LILRA2Q8N149 483 aa18.21■□□□□ 0.51
MCF2L-212ENST00000420013 TOR1AIP2Q8NFQ8 470 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms