RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 APOOQ9BUR5 198 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 C1QTNF2Q9BXJ5 285 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 ANKRD19PQ9H560 264 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 RPRD1BQ9NQG5 326 aaKnown RBP13.46□□□□□ -0.26
HDAC9-208ENST00000417496 MRPS2Q9Y399 296 aaKnown RBP13.46□□□□□ -0.26
HDAC9-208ENST00000417496 TRIOO75962 3097 aa13.46□□□□□ -0.26
HDAC9-208ENST00000417496 LOC105369274A0A096LPK9 316 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 DAPL1A0PJW8 107 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 UNC119BA6NIH7 251 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 PRR19A6NJB7 356 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 DUXAA6NLW8 204 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 GPR89AB7ZAQ6 455 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 EIF4EP06730 217 aaKnown RBP13.45□□□□□ -0.26
HDAC9-208ENST00000417496 GPR89BP0CG08 455 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 IL9P15248 144 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 C5AR1P21730 350 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 HLA-DMAP28067 261 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 EVI2BP34910 448 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 ACVR1BP36896 505 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 HCCSP53701 268 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 RPS21P63220 83 aaKnown RBP13.45□□□□□ -0.26
HDAC9-208ENST00000417496 EEF1A1P68104 462 aaKnown RBP13.45□□□□□ -0.26
HDAC9-208ENST00000417496 FAPQ12884 760 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 MZT2BQ6NZ67 158 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 NIPAL3Q6P499 406 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 TRILQ7L0X0 811 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 SYT9Q86SS6 491 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 PAQR7Q86WK9 346 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 OR4N4Q8N0Y3 316 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 DNAJC5GQ8N7S2 189 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 SAMD12Q8N8I0 201 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 DUSP18Q8NEJ0 188 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 OR4K14Q8NGD5 310 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 KXD1Q9BQD3 176 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 RPP25Q9BUL9 199 aaKnown RBP13.45□□□□□ -0.26
HDAC9-208ENST00000417496 LRRC72A6NJI9 287 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 BHLHE40O14503 412 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 RFPL3O75679 317 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 HMGN1P05114 100 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 OR1Q1Q15612 314 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 RNASE12Q5GAN4 147 aaKnown RBP13.45□□□□□ -0.26
HDAC9-208ENST00000417496 MZT2AQ6P582 158 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 MEPCEQ7L2J0 689 aaKnown RBP13.45□□□□□ -0.26
HDAC9-208ENST00000417496 ASPGQ86U10 573 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 OR2L13Q8N349 312 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 SLC37A3Q8NCC5 494 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 OR4M1Q8NGD0 313 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 OR13C5Q8NGS8 318 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 OR5W2Q8NH69 310 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 GRHL3Q8TE85 626 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 TSACCQ96A04 125 aaPredicted RBP13.45□□□□□ -0.26
HDAC9-208ENST00000417496 CLDND1Q9NY35 253 aa13.45□□□□□ -0.26
HDAC9-208ENST00000417496 USP36Q9P275 1121 aaKnown RBP13.45□□□□□ -0.26
HDAC9-208ENST00000417496 ZNF624Q9P2J8 865 aaPredicted RBP13.45□□□□□ -0.26
HDAC9-208ENST00000417496 PRUNE2Q8WUY3 3088 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 RGS9O75916 674 aaPredicted RBP13.44□□□□□ -0.26
HDAC9-208ENST00000417496 SAGP10523 405 aaPredicted RBP13.44□□□□□ -0.26
HDAC9-208ENST00000417496 ARSBP15848 533 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 PRKCAP17252 672 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 SRP9P49458 86 aaKnown RBP13.44□□□□□ -0.26
HDAC9-208ENST00000417496 PPP2CBP62714 309 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 PPP2CAP67775 309 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 TNFRSF17Q02223 184 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 ACSM1Q08AH1 577 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 EXOSC7Q15024 291 aaKnown RBP13.44□□□□□ -0.26
HDAC9-208ENST00000417496 ARHGAP11BQ3KRB8 267 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 PRPF38BQ5VTL8 546 aaKnown RBP13.44□□□□□ -0.26
HDAC9-208ENST00000417496 FAM109BQ6ICB4 259 aaPredicted RBP13.44□□□□□ -0.26
HDAC9-208ENST00000417496 TMEM52Q8NDY8 209 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 OR5T3Q8NGG3 340 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 OR10G6Q8NH81 332 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 TMEM239Q8WW34 195 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 KISS1RQ969F8 398 aaPredicted RBP13.44□□□□□ -0.26
HDAC9-208ENST00000417496 CD180Q99467 661 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 SARGQ9BW04 601 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 IFT27Q9BW83 186 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 CCDC86Q9H6F5 360 aaKnown RBP13.44□□□□□ -0.26
HDAC9-208ENST00000417496 CD93Q9NPY3 652 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 MED17Q9NVC6 651 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 ASB6Q9NWX5 421 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 POLHQ9Y253 713 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 RASD1Q9Y272 281 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 BMP7P18075 431 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 OR12D2P58182 307 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 GPR176Q14439 515 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 ZAR1Q86SH2 424 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 RFLNBQ8N5W9 214 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 NR4A3Q92570 626 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 GAL3ST3Q96A11 431 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 HS6ST2Q96MM7 605 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 MARVELD1Q9BSK0 173 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 SRMSQ9H3Y6 488 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 KLHL1Q9NR64 748 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 ENAMQ9NRM1 1142 aa13.44□□□□□ -0.26
HDAC9-208ENST00000417496 LYARQ9NX58 379 aaKnown RBP13.44□□□□□ -0.26
HDAC9-208ENST00000417496 ZNF223Q9UK11 482 aaPredicted RBP13.44□□□□□ -0.26
HDAC9-208ENST00000417496 A0A0B4J203 849 aa13.43□□□□□ -0.26
HDAC9-208ENST00000417496 PRSS38A1L453 326 aa13.43□□□□□ -0.26
HDAC9-208ENST00000417496 TRAPPC13A5PLN9 417 aa13.43□□□□□ -0.26
HDAC9-208ENST00000417496 J3QLW9 94 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms