RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 RAB27BO00194 218 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 CXCR6O00574 342 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 MAN2B1O00754 1011 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 LDLRAD4O15165 306 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 SPINT1O43278 529 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 GATCO43716 136 aaKnown RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 NARSO43776 548 aaKnown RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 PAPSS2O95340 614 aaPredicted RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TRBC1P01850 177 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 C1SP09871 688 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 SBK2P0C263 348 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 CD72P21854 359 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 GADD45AP24522 165 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 GNPDA1P46926 289 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 SLC9A3P48764 834 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 FHITP49789 147 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 PNLIPRP2P54317 469 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 MZT1Q08AG7 82 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 RIPPLY1Q0D2K3 151 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 CREB3L2Q70SY1 520 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 LDB1Q86U70 411 aaPredicted RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TTC29Q8NA56 475 aaPredicted RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 ZNF548Q8NEK5 533 aaPredicted RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 SUN3Q8TAQ9 357 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 PROKR1Q8TCW9 393 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 GTF2H4Q92759 462 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 ELSPBP1Q96BH3 223 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 HAVCR1Q96D42 359 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 OMA1Q96E52 524 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 KCNA7Q96RP8 456 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 PARD6GQ9BYG4 376 aaPredicted RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 DNTTIP1Q9H147 329 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 OR52A5Q9H2C5 316 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 OR51V1Q9H2C8 321 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 SLC6A15Q9H2J7 730 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 AUNIPQ9H7T9 357 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 NIPAL2Q9H841 368 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 CARS2Q9HA77 564 aaKnown RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 BPIFA1Q9NP55 256 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 HAO2Q9NYQ3 351 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 DEC1Q9P2X7 70 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 KLHL21Q9UJP4 597 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 SLC25A13Q9UJS0 675 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 NDRG4Q9ULP0 352 aaKnown RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TBC1D24Q9ULP9 559 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 SNX7Q9UNH6 387 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 HS3ST2Q9Y278 367 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 SF3B6Q9Y3B4 125 aaKnown RBP8.76□□□□□ -1.01
SNHG3-201ENST00000413987 KLK4Q9Y5K2 254 aa8.76□□□□□ -1.01
SNHG3-201ENST00000413987 TBC1D3BA6NDS4 549 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 ANKRD61A6NGH8 418 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 PPP6CO00743 305 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 MBTPS2O43462 519 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 CTSLP07711 333 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 CELA3BP08861 270 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 CYP4B1P13584 511 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 HLA-DMAP28067 261 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 AKT2P31751 481 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 NKG7Q16617 165 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 CDKL4Q5MAI5 379 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 MANEAQ5SRI9 462 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 KDM4DQ6B0I6 523 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 TMEM179BQ7Z7N9 219 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 CILP2Q8IUL8 1156 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 UBE2J2Q8N2K1 259 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 FAM86B1Q8N7N1 296 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 TMEM185AQ8NFB2 350 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 MDGA1Q8NFP4 955 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 OR2AP1Q8NGE2 309 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 OR13C4Q8NGS5 318 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 OR2A12Q8NGT7 310 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 SNAPC3Q92966 411 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 PYCR2Q96C36 320 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 PRRC1Q96M27 445 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 SDHCQ99643 169 aaPredicted RBP8.75□□□□□ -1.01
SNHG3-201ENST00000413987 SLC22A4Q9H015 551 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 ZNF556Q9HAH1 456 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 BCO1Q9HAY6 547 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 HEBP1Q9NRV9 189 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 PLCXD1Q9NUJ7 323 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 B3GNT2Q9NY97 397 aa8.75□□□□□ -1.01
SNHG3-201ENST00000413987 LOC100509620A0A075B734 347 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 TMEM265A0A087WTH1 108 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 A0A0G2JMP0 313 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 CCDC182A6NF36 153 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 NPIPB13A6NJU9 1138 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 NPIPB4C9JG80 1138 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 hCG_2039718K7EN88 272 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 M0R082 166 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 ANKRD28O15084 1053 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 ZNF264O43296 627 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 KLK8O60259 260 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 NSA2O95478 260 aaKnown RBP8.74□□□□□ -1.01
SNHG3-201ENST00000413987 RLN1P04808 185 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 CAPN1P07384 714 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 FDXRP22570 491 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 TNK1Q13470 666 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 PDGFRLQ15198 375 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 Q5BKY6 102 aa8.74□□□□□ -1.01
SNHG3-201ENST00000413987 ANKRD34AQ69YU3 496 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms