RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CMC1Q7Z7K0 106 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 TMPRSS11BQ86T26 416 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 ADAMTSL2Q86TH1 951 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 CEP97Q8IW35 865 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 CLEC4FQ8N1N0 589 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 SVOPLQ8N434 492 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 SIRT6Q8N6T7 355 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF740Q8NDX6 193 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 SIMC1Q8NDZ2 872 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 PLPP5Q8NEB5 264 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 OR7G1Q8NGA0 311 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 OR1N1Q8NGS0 311 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 LILRB4Q8NHJ6 448 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 DYNC2LI1Q8TCX1 351 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 SSC4DQ8WTU2 575 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 ANKRD49Q8WVL7 239 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 NEIL2Q969S2 332 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 PPWD1Q96BP3 646 aaKnown RBP4.9□□□□□ -1.63
LINC00342-201ENST00000412393 LRRC58Q96CX6 371 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 YIPF6Q96EC8 236 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 MOCOSQ96EN8 888 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 MED30Q96HR3 178 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 IMMP1LQ96LU5 166 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 CCDC115Q96NT0 180 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 SIGLEC11Q96RL6 698 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 AIF1LQ9BQI0 150 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 DCUN1D5Q9BTE7 237 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 SARGQ9BW04 601 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 FUNDC2Q9BWH2 189 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 OR2B2Q9GZK3 357 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 VN1R1Q9GZP7 353 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 SEMA6AQ9H2E6 1030 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 SPNS1Q9H2V7 528 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 PELI2Q9HAT8 420 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 NTN4Q9HB63 628 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 POPDC3Q9HBV1 291 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 C19orf25Q9UFG5 118 aaPredicted RBP4.9□□□□□ -1.63
LINC00342-201ENST00000412393 FBXO9Q9UK97 447 aaPredicted RBP4.9□□□□□ -1.63
LINC00342-201ENST00000412393 SLC22A14Q9Y267 594 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 OARD1Q9Y530 152 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 KCNE2Q9Y6J6 123 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 LRRK2Q5S007 2527 aa4.9□□□□□ -1.63
LINC00342-201ENST00000412393 PRRC2CQ9Y520 2896 aaKnown RBP4.9□□□□□ -1.63
LINC00342-201ENST00000412393 SPTAN1Q13813 2472 aaKnown RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 CROCCQ5TZA2 2017 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 USP9XQ93008 2570 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 PCNX1Q96RV3 2341 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 TRAV17A0A0B4J275 112 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 OR2W5A6NFC9 320 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 URADA6NGE7 173 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 PRAMEF25A6NGN4 478 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 NCF1BA6NI72 391 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 NCF1CA8MVU1 366 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 EVPLLA8MZ36 301 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 GSTA4O15217 222 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 PRODHO43272 600 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 CHST10O43529 356 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 GALR3O60755 368 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 DNAJB6O75190 326 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 EEDO75530 441 aaKnown RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 PRKD3O94806 890 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 SEC24DO94855 1032 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 WDR47O94967 919 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 F10P00742 488 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 KRT6AP02538 564 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 KRT6BP04259 564 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 FHP07954 510 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 HTR1AP08908 422 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 C1GALT1C1LP0DN25 315 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 NCF1P14598 390 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 STMN1P16949 149 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 ALOX12P18054 663 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 HNF4AP41235 474 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 HNMTP50135 292 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 TNFSF10P50591 281 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 SLC7A2P52569 658 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 CDH13P55290 713 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 RAB8AP61006 207 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 OLR1P78380 273 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 PPP2R2BQ00005 443 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 PRKCDQ05655 676 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 RCAN2Q14206 197 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 E2F2Q14209 437 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 TSNQ15631 228 aaKnown RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 FAM83EQ2M2I3 478 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 SMU1Q2TAY7 513 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 BTBD16Q32M84 506 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 C18orf21Q32NC0 220 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 DEFB134Q4QY38 66 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 TECRLQ5HYJ1 363 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 PLAG1Q6DJT9 500 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 RPUSD3Q6P087 351 aaKnown RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 PAPD4Q6PIY7 484 aaKnown RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 FAM180AQ6UWF9 173 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 RNF165Q6ZSG1 346 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 ABHD13Q7L211 337 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 MAMDC2Q7Z304 686 aaPredicted RBP4.89□□□□□ -1.63
LINC00342-201ENST00000412393 ANKRD37Q7Z713 158 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 GPSM1Q86YR5 675 aa4.89□□□□□ -1.63
LINC00342-201ENST00000412393 KLHDC8AQ8IYD2 350 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms