RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 MAP3K8P41279 467 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 PLAURQ03405 335 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 ZFP69Q49AA0 526 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 MEPCEQ7L2J0 689 aaKnown RBP14.74□□□□□ -0.05
HOXD3-202ENST00000410016 PRSS41Q7RTY9 318 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 GID4Q8IVV7 300 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 LNX2Q8N448 690 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 TMEM52Q8NDY8 209 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 KISS1RQ969F8 398 aaPredicted RBP14.74□□□□□ -0.05
HOXD3-202ENST00000410016 OTULINQ96BN8 352 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 HS6ST2Q96MM7 605 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 CD180Q99467 661 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 MTIF3Q9H2K0 278 aaKnown RBP14.74□□□□□ -0.05
HOXD3-202ENST00000410016 CACYBPQ9HB71 228 aaKnown RBP14.74□□□□□ -0.05
HOXD3-202ENST00000410016 IL21RQ9HBE5 538 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 KRCC1Q9NPI7 259 aaPredicted RBP14.74□□□□□ -0.05
HOXD3-202ENST00000410016 DUSP22Q9NRW4 184 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 CLDND1Q9NY35 253 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 SATB2Q9UPW6 733 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 PCDHGB7Q9Y5F8 929 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 CENPXA8MT69 81 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 FAM47E-STBD1D6RA91 191 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 PLOD3O60568 738 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 POLR2CP19387 275 aaPredicted RBP14.74□□□□□ -0.05
HOXD3-202ENST00000410016 PTBP1P26599 531 aaKnown RBP eCLIP14.74□□□□□ -0.05
HOXD3-202ENST00000410016 NDUFA5Q16718 116 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 PRRT3Q5FWE3 981 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 LCN1P1Q5VSP4 162 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 THSD4Q6ZMP0 1018 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 DMRTB1Q96MA1 342 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 KCNJ15Q99712 375 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 DDX28Q9NUL7 540 aaKnown RBP14.74□□□□□ -0.05
HOXD3-202ENST00000410016 MALT1Q9UDY8 824 aa14.74□□□□□ -0.05
HOXD3-202ENST00000410016 NUFIP1Q9UHK0 495 aaKnown RBP14.74□□□□□ -0.05
HOXD3-202ENST00000410016 A0A087WV62 115 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 NPIPA5A0A0B4J1W7 369 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 FAM172BPA6NC97 362 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 URADA6NGE7 173 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 NPIPA7E9PJI5 369 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 RNF13O43567 381 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 FGF17O60258 216 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 NPIPA8P0DM63 369 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 LAMP2P13473 410 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 CFL1P23528 166 aaKnown RBP14.73□□□□□ -0.05
HOXD3-202ENST00000410016 MGAT2Q10469 447 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 PRPF38BQ5VTL8 546 aaKnown RBP14.73□□□□□ -0.05
HOXD3-202ENST00000410016 SMARCD3Q6STE5 483 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 IQCF2Q8IXL9 164 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 TMEM99Q8N816 258 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 FANK1Q8TC84 345 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 NACC2Q96BF6 587 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 ZC3HAV1LQ96H79 300 aaKnown RBP14.73□□□□□ -0.05
HOXD3-202ENST00000410016 RNF170Q96K19 258 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 WDR92Q96MX6 357 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 PPIL3Q9H2H8 161 aaKnown RBP14.73□□□□□ -0.05
HOXD3-202ENST00000410016 LYRM4Q9HD34 91 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 CD93Q9NPY3 652 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 WDR70Q9NW82 654 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 CYR61O00622 381 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 IFI30P13284 250 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 ANKRD54Q6NXT1 300 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 TMPRSS11FQ6ZWK6 438 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 TRILQ7L0X0 811 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 ABHD13Q7L211 337 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 C7orf61Q8IZ16 206 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 CDRT4Q8N9R6 151 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 CAMKVQ8NCB2 501 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 DUSP18Q8NEJ0 188 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 FYTTD1Q96QD9 318 aaKnown RBP14.73□□□□□ -0.05
HOXD3-202ENST00000410016 TMEM43Q9BTV4 400 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 ALG8Q9BVK2 526 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 TMEM106CQ9BVX2 250 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 RANGRFQ9HD47 186 aaPredicted RBP14.73□□□□□ -0.05
HOXD3-202ENST00000410016 RBFOX1Q9NWB1 397 aaKnown RBP14.73□□□□□ -0.05
HOXD3-202ENST00000410016 ACTR10Q9NZ32 417 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 SIGLEC7Q9Y286 467 aa14.73□□□□□ -0.05
HOXD3-202ENST00000410016 YBX2Q9Y2T7 364 aaKnown RBP14.73□□□□□ -0.05
HOXD3-202ENST00000410016 LRRC72A6NJI9 287 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 H0YGG7 62 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 AGRPO00253 132 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 LINC01565O15544 149 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 FMO6PO60774 539 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 HOXB2P14652 356 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 BMP7P18075 431 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 PAICSP22234 425 aaKnown RBP14.72□□□□□ -0.05
HOXD3-202ENST00000410016 LSSP48449 732 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 ARF3P61204 181 aaPredicted RBP14.72□□□□□ -0.05
HOXD3-202ENST00000410016 FOXK2Q01167 660 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 GPR18Q14330 331 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 PRICKLE4Q2TBC4 344 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 GARNL3Q5VVW2 1013 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 TRIM48Q8IWZ4 208 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 FAM3CQ92520 227 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 AHCYL2Q96HN2 611 aaKnown RBP14.72□□□□□ -0.05
HOXD3-202ENST00000410016 STACQ99469 402 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 MEPEQ9NQ76 525 aaPredicted RBP14.72□□□□□ -0.05
HOXD3-202ENST00000410016 CMC2Q9NRP2 79 aa14.72□□□□□ -0.05
HOXD3-202ENST00000410016 OR6C74A6NCV1 312 aa14.71□□□□□ -0.05
HOXD3-202ENST00000410016 RFPL3O75679 317 aa14.71□□□□□ -0.05
HOXD3-202ENST00000410016 APBB3O95704 486 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms