RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ANKK1Q8NFD2 765 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 OR2T33Q8NG76 320 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 MND1Q9BWT6 205 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 TRIM2Q9C040 744 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 C20orf141Q9NUB4 165 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 SUSD2Q9UGT4 822 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 CLCA3PQ9Y6N3 262 aa19.11■□□□□ 0.65
USP39-203ENST00000409470 CACNA1EQ15878 2313 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 RP1P56715 2156 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 A0A0B4J2E0 115 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 A0A1B0GWA3 101 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 A0A1B0GX12 115 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 NPIPB9F8W1W9 429 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 DSCR3O14972 297 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 NADKO95544 446 aaPredicted RBP19.1■□□□□ 0.65
USP39-203ENST00000409470 RAB36O95755 333 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 TGFBR1P36897 503 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 ACAA2P42765 397 aaKnown RBP19.1■□□□□ 0.65
USP39-203ENST00000409470 RHAGQ02094 409 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 NR0B2Q15466 257 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 TSTQ16762 297 aaKnown RBP19.1■□□□□ 0.65
USP39-203ENST00000409470 KLHL22Q53GT1 634 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 HSDL2Q6YN16 418 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 ZNF550Q7Z398 422 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 ADCK1Q86TW2 530 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 OR52I1Q8NGK6 324 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 FANK1Q8TC84 345 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 DYNC2LI1Q8TCX1 351 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 PHOX2BQ99453 314 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 OR8D2Q9GZM6 311 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 ZNF768Q9H5H4 540 aaKnown RBP19.1■□□□□ 0.65
USP39-203ENST00000409470 ATP13A2Q9NQ11 1180 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 FSCN3Q9NQT6 498 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 SIDT1Q9NXL6 827 aaKnown RBP19.1■□□□□ 0.65
USP39-203ENST00000409470 FLRT3Q9NZU0 649 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 ATXN7L1Q9ULK2 861 aaPredicted RBP19.1■□□□□ 0.65
USP39-203ENST00000409470 TMEM5Q9Y2B1 443 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 LOC100506127A0A0U1RQW1 187 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 A0A1B0GVG6 124 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 A0A1B0GX78 115 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 SURF4O15260 269 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 CHP2O43745 196 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 PRKNO60260 465 aaPredicted RBP19.1■□□□□ 0.65
USP39-203ENST00000409470 FUT1P19526 365 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 GCGRP47871 477 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 SERPINB10P48595 397 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 MED25Q71SY5 747 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 ZNF321PQ8N8H1 164 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 PIGKQ92643 395 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 ZNF501Q96CX3 271 aaPredicted RBP19.1■□□□□ 0.65
USP39-203ENST00000409470 BPIFA2Q96DR5 249 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 RNFT2Q96EX2 444 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 HS6ST2Q96MM7 605 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 PILRBQ9UKJ0 227 aa19.1■□□□□ 0.65
USP39-203ENST00000409470 A0A1B0GTQ1 180 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 SYNDIG1LA6NDD5 238 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 MYL12BO14950 172 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 ADAM11O75078 769 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 HMGN1P05114 100 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 INHBBP09529 407 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 MSL3P1P0C860 447 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 SLC37A1P57057 533 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.09■□□□□ 0.65
USP39-203ENST00000409470 VWA2Q5GFL6 755 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 TMEM71Q6P5X7 295 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 CMIPQ8IY22 773 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 PRSS58Q8IYP2 241 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 CADM2Q8N3J6 435 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 OR52L1Q8NGH7 329 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 OR4C3Q8NH37 302 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 MAFAQ8NHW3 353 aaPredicted RBP19.09■□□□□ 0.65
USP39-203ENST00000409470 EFHD2Q96C19 240 aaPredicted RBP19.09■□□□□ 0.65
USP39-203ENST00000409470 OR51E2Q9H255 320 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 DCSTAMPQ9H295 470 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 OR52D1Q9H346 318 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 ZBTB20Q9HC78 741 aaPredicted RBP19.09■□□□□ 0.65
USP39-203ENST00000409470 HHATLQ9HCP6 504 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 RPS6KB2Q9UBS0 482 aa19.09■□□□□ 0.65
USP39-203ENST00000409470 DIMT1Q9UNQ2 313 aaKnown RBP19.09■□□□□ 0.65
USP39-203ENST00000409470 IGKV3D-11A0A0A0MRZ8 115 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 IRGMA1A4Y4 181 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 SERINC4A6NH21 518 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 KDM4EB2RXH2 506 aaPredicted RBP19.08■□□□□ 0.65
USP39-203ENST00000409470 CSO75390 466 aaKnown RBP19.08■□□□□ 0.65
USP39-203ENST00000409470 CSTAP01040 98 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 SAGP10523 405 aaPredicted RBP19.08■□□□□ 0.65
USP39-203ENST00000409470 BMP7P18075 431 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 RORAP35398 523 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 BMXP51813 675 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 SPHARQ15513 63 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 ZNF829Q3KNS6 432 aaPredicted RBP19.08■□□□□ 0.65
USP39-203ENST00000409470 ALG10BQ5I7T1 473 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 YOD1Q5VVQ6 348 aaPredicted RBP19.08■□□□□ 0.65
USP39-203ENST00000409470 RNLSQ5VYX0 342 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 GUSBP11Q6P575 273 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 BMP8AQ7Z5Y6 402 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 CROCCP3Q8IVE0 287 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 BRIX1Q8TDN6 353 aaKnown RBP19.08■□□□□ 0.65
USP39-203ENST00000409470 SLC35B4Q969S0 331 aa19.08■□□□□ 0.65
USP39-203ENST00000409470 DTNBP1Q96EV8 351 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms