RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 TAS2R1Q9NYW7 299 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 PRORSD1PA6NEY8 169 aa26.7■■□□□ 1.86
USP42-202ENST00000404008 HCRTR2O43614 444 aa26.7■■□□□ 1.86
USP42-202ENST00000404008 BCAS1O75363 584 aaPredicted RBP26.7■■□□□ 1.86
USP42-202ENST00000404008 EEF1A1P68104 462 aaKnown RBP26.7■■□□□ 1.86
USP42-202ENST00000404008 SKP2Q13309 424 aa26.7■■□□□ 1.86
USP42-202ENST00000404008 LARS2Q15031 903 aaKnown RBP26.7■■□□□ 1.86
USP42-202ENST00000404008 ZNF311Q5JNZ3 666 aa26.7■■□□□ 1.86
USP42-202ENST00000404008 RNF220Q5VTB9 566 aa26.7■■□□□ 1.86
USP42-202ENST00000404008 ZNF836Q6ZNA1 936 aa26.7■■□□□ 1.86
USP42-202ENST00000404008 CCDC80Q76M96 950 aa26.7■■□□□ 1.86
USP42-202ENST00000404008 B4GALNT2Q8NHY0 566 aa26.7■■□□□ 1.86
USP42-202ENST00000404008 KCTD14Q9BQ13 255 aaPredicted RBP26.7■■□□□ 1.86
USP42-202ENST00000404008 SLX1AQ9BQ83 275 aa26.7■■□□□ 1.86
USP42-202ENST00000404008 SPATA5L1Q9BVQ7 753 aa26.7■■□□□ 1.86
USP42-202ENST00000404008 ICAM5Q9UMF0 924 aa26.7■■□□□ 1.86
USP42-202ENST00000404008 ZNF232Q9UNY5 417 aa26.7■■□□□ 1.86
USP42-202ENST00000404008 FREM3P0C091 2139 aa26.69■■□□□ 1.86
USP42-202ENST00000404008 SHANK1Q9Y566 2161 aa26.69■■□□□ 1.86
USP42-202ENST00000404008 GMFGO60234 142 aa26.69■■□□□ 1.86
USP42-202ENST00000404008 EIF4E2O60573 245 aaKnown RBP26.69■■□□□ 1.86
USP42-202ENST00000404008 WISP2O76076 250 aa26.69■■□□□ 1.86
USP42-202ENST00000404008 PDE9AO76083 593 aa26.69■■□□□ 1.86
USP42-202ENST00000404008 CELA3AP09093 270 aa26.69■■□□□ 1.86
USP42-202ENST00000404008 TDGF1P3P51864 188 aa26.69■■□□□ 1.86
USP42-202ENST00000404008 SAMD4BQ5PRF9 694 aaKnown RBP26.69■■□□□ 1.86
USP42-202ENST00000404008 MRPL2Q5T653 305 aaKnown RBP26.69■■□□□ 1.86
USP42-202ENST00000404008 PATL1Q86TB9 770 aaKnown RBP26.69■■□□□ 1.86
USP42-202ENST00000404008 RNF148Q8N7C7 305 aa26.69■■□□□ 1.86
USP42-202ENST00000404008 RSPO3Q9BXY4 272 aaPredicted RBP26.69■■□□□ 1.86
USP42-202ENST00000404008 PTGES2Q9H7Z7 377 aa26.69■■□□□ 1.86
USP42-202ENST00000404008 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.69■■□□□ 1.86
USP42-202ENST00000404008 PACSIN3Q9UKS6 424 aa26.69■■□□□ 1.86
USP42-202ENST00000404008 CDHR4A6H8M9 788 aa26.68■■□□□ 1.86
USP42-202ENST00000404008 NPIPA5E9PKD4 350 aa26.68■■□□□ 1.86
USP42-202ENST00000404008 SERPINB7O75635 380 aa26.68■■□□□ 1.86
USP42-202ENST00000404008 HPNP05981 417 aa26.68■■□□□ 1.86
USP42-202ENST00000404008 UBTFL6P0CB48 400 aaPredicted RBP26.68■■□□□ 1.86
USP42-202ENST00000404008 ARMC8Q8IUR7 673 aa26.68■■□□□ 1.86
USP42-202ENST00000404008 LAT2Q9GZY6 243 aa26.68■■□□□ 1.86
USP42-202ENST00000404008 DEFB127Q9H1M4 99 aa26.68■■□□□ 1.86
USP42-202ENST00000404008 SEC14L3Q9UDX4 400 aa26.68■■□□□ 1.86
USP42-202ENST00000404008 CD300AQ9UGN4 299 aa26.68■■□□□ 1.86
USP42-202ENST00000404008 NPIPA1Q9UND3 350 aa26.68■■□□□ 1.86
USP42-202ENST00000404008 CHST2Q9Y4C5 530 aa26.68■■□□□ 1.86
USP42-202ENST00000404008 HEATR5AQ86XA9 2040 aa26.68■■□□□ 1.86
USP42-202ENST00000404008 TRAPPC6AO75865 159 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 MFN2O95140 757 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 HSD17B1P14061 328 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 SRD5A2P31213 254 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 PRKAR1BP31321 381 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 P2RX1P51575 399 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 CRYBA2P53672 197 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 DSCR4P56555 118 aaPredicted RBP26.67■■□□□ 1.86
USP42-202ENST00000404008 GANABQ14697 944 aaKnown RBP26.67■■□□□ 1.86
USP42-202ENST00000404008 SLC10A1Q14973 349 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 TOMM20Q15388 145 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 SPATS1Q496A3 300 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 PRICKLE2Q7Z3G6 844 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 TMCO5AQ8N6Q1 288 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 CNOT9Q92600 299 aaKnown RBP26.67■■□□□ 1.86
USP42-202ENST00000404008 SLC7A6OSQ96CW6 309 aaPredicted RBP26.67■■□□□ 1.86
USP42-202ENST00000404008 C1GALT1C1Q96EU7 318 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 DTNBP1Q96EV8 351 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 GPR137Q96N19 417 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 KLHDC3Q9BQ90 382 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 ACKR4Q9NPB9 350 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 EXOSC3Q9NQT5 275 aaKnown RBP26.67■■□□□ 1.86
USP42-202ENST00000404008 RLIMQ9NVW2 624 aa26.67■■□□□ 1.86
USP42-202ENST00000404008 DNAJB12Q9NXW2 375 aaKnown RBP26.67■■□□□ 1.86
USP42-202ENST00000404008 M0QX08 132 aa26.66■■□□□ 1.86
USP42-202ENST00000404008 DPP4P27487 766 aa26.66■■□□□ 1.86
USP42-202ENST00000404008 SUMO3P55854 103 aaPredicted RBP26.66■■□□□ 1.86
USP42-202ENST00000404008 DMTNQ08495 405 aa26.66■■□□□ 1.86
USP42-202ENST00000404008 ZSWIM7Q19AV6 140 aa26.66■■□□□ 1.86
USP42-202ENST00000404008 FAM83FQ8NEG4 500 aaPredicted RBP26.66■■□□□ 1.86
USP42-202ENST00000404008 TNIP2Q8NFZ5 429 aa26.66■■□□□ 1.86
USP42-202ENST00000404008 TAMM41Q96BW9 452 aa26.66■■□□□ 1.86
USP42-202ENST00000404008 OR2B2Q9GZK3 357 aa26.66■■□□□ 1.86
USP42-202ENST00000404008 DKKL1Q9UK85 242 aa26.66■■□□□ 1.86
USP42-202ENST00000404008 MRPS18CQ9Y3D5 142 aaKnown RBP26.66■■□□□ 1.86
USP42-202ENST00000404008 ANKUB1A6NFN9 424 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 CYP7B1O75881 506 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 IGHG3P01860 377 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 HTR1EP28566 365 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 DHRS4L2Q6PKH6 230 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 GRAMD2AQ8IUY3 354 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 ARHGAP24Q8N264 748 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 CLIP4Q8N3C7 705 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 FAM156AQ8NDB6 213 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 TOR1AIP2Q8NFQ8 470 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 OR5W2Q8NH69 310 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 ARMC7Q9H6L4 198 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 PLSCR2Q9NRY7 297 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 LIPGQ9Y5X9 500 aa26.65■■□□□ 1.86
USP42-202ENST00000404008 CXCR6O00574 342 aa26.64■■□□□ 1.86
USP42-202ENST00000404008 GSTA4O15217 222 aa26.64■■□□□ 1.86
USP42-202ENST00000404008 ZIC3O60481 467 aa26.64■■□□□ 1.86
USP42-202ENST00000404008 OPN1SWP03999 348 aa26.64■■□□□ 1.86
USP42-202ENST00000404008 TLE1Q04724 770 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms