RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 DESI1Q6ICB0 168 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 PAPD4Q6PIY7 484 aaKnown RBP23.57■■□□□ 1.36
CPNE1-205ENST00000401607 FAM198BQ6UWH4 519 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 RRM2BQ7LG56 351 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 ZNF550Q7Z398 422 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 KIF18BQ86Y91 864 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 C17orf47Q8NEP4 570 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 ADOQ96SZ5 270 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 TMEM27Q9HBJ8 222 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 A0A0B4J2E0 115 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 A0A1B0GX12 115 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 KLF4O43474 513 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 TSPAN2O60636 221 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 KLK3P07288 261 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-205ENST00000401607 PTNP21246 168 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 ETV5P41161 510 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 RNF4P78317 190 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 INSM1Q01101 510 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-205ENST00000401607 PIGFQ07326 219 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 BROXQ5VW32 411 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 APOOLQ6UXV4 268 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 CPEB2Q7Z5Q1 589 aaKnown RBP23.57■■□□□ 1.36
CPNE1-205ENST00000401607 POGLUT1Q8NBL1 392 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 FAM71CQ8NEG0 241 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 SLC35A3Q9Y2D2 325 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 LOXL2Q9Y4K0 774 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 ZNF318Q5VUA4 2279 aa23.57■■□□□ 1.36
CPNE1-205ENST00000401607 SMIM31A0A1B0GVY4 71 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 A0A1B0GWA3 101 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 PRR33A8MZF0 331 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 REM1O75628 298 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 CYC1P08574 325 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 ADH7P40394 386 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 CLDN6P56747 220 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 CDC42P60953 191 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 CD226Q15762 336 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 C12orf73Q69YU5 71 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 ZNF517Q6ZMY9 492 aaPredicted RBP23.56■■□□□ 1.36
CPNE1-205ENST00000401607 LSMEM1Q8N8F7 131 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 MR1Q95460 341 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 TMIGD2Q96BF3 282 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 HSPBAP1Q96EW2 488 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 TRIM2Q9C040 744 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 DSN1Q9H410 356 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 IMPAD1Q9NX62 359 aa23.56■■□□□ 1.36
CPNE1-205ENST00000401607 AKAP7Q9P0M2 348 aaPredicted RBP23.56■■□□□ 1.36
CPNE1-205ENST00000401607 TEX51A0A1B0GUA7 166 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 TBXA2RP21731 343 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 FPR3P25089 353 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 PLCXD2Q0VAA5 305 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 FAM69BQ5VUD6 431 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 KCTD8Q6ZWB6 473 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 SLC34A3Q8N130 599 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 GATSQ8NAP1 163 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 ZNF527Q8NB42 609 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 GRHL3Q8TE85 626 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 PHOX2BQ99453 314 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 RHNO1Q9BSD3 238 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 DUSP21Q9H596 190 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 LIN28AQ9H9Z2 209 aaKnown RBP23.55■■□□□ 1.36
CPNE1-205ENST00000401607 NXT1Q9UKK6 140 aaKnown RBP23.55■■□□□ 1.36
CPNE1-205ENST00000401607 B3GALT1Q9Y5Z6 326 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 KIF26BQ2KJY2 2108 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 PTGES3LE9PB15 166 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 ICOSLGO75144 302 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 RFPL3O75679 317 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 LCN1P31025 176 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 GPR4P46093 362 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 SLC35A2P78381 396 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 TEKQ02763 1124 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 SPARTQ8N0X7 666 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 TMEM239Q8WW34 195 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 C8orf44Q96CB5 159 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 OMA1Q96E52 524 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 LPAR4Q99677 370 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 PLA2G12AQ9BZM1 189 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 RBM38Q9H0Z9 239 aaKnown RBP23.55■■□□□ 1.36
CPNE1-205ENST00000401607 GPN3Q9UHW5 284 aaPredicted RBP23.55■■□□□ 1.36
CPNE1-205ENST00000401607 TPRKBQ9Y3C4 175 aa23.55■■□□□ 1.36
CPNE1-205ENST00000401607 SCDO00767 359 aa23.54■■□□□ 1.36
CPNE1-205ENST00000401607 CHP2O43745 196 aa23.54■■□□□ 1.36
CPNE1-205ENST00000401607 ABCD3P28288 659 aa23.54■■□□□ 1.36
CPNE1-205ENST00000401607 IL12BP29460 328 aa23.54■■□□□ 1.36
CPNE1-205ENST00000401607 E2F1Q01094 437 aa23.54■■□□□ 1.36
CPNE1-205ENST00000401607 CDCP2Q5VXM1 449 aa23.54■■□□□ 1.36
CPNE1-205ENST00000401607 RASSF6Q6ZTQ3 369 aa23.54■■□□□ 1.36
CPNE1-205ENST00000401607 IQCF1Q8N6M8 205 aa23.54■■□□□ 1.36
CPNE1-205ENST00000401607 EGLN3Q9H6Z9 239 aa23.54■■□□□ 1.36
CPNE1-205ENST00000401607 SCN3BQ9NY72 215 aa23.54■■□□□ 1.36
CPNE1-205ENST00000401607 NDUFA13Q9P0J0 144 aa23.54■■□□□ 1.36
CPNE1-205ENST00000401607 PMS2P1A4D2B8 440 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 C4orf47A7E2U8 309 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 OIP5O43482 229 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 FAM20BO75063 409 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 HPGDP15428 266 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 KIRREL2Q6UWL6 708 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 HSDL2Q6YN16 418 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 P3H2Q8IVL5 708 aa23.53■■□□□ 1.36
CPNE1-205ENST00000401607 RNF113BQ8IZP6 322 aaKnown RBP23.53■■□□□ 1.36
CPNE1-205ENST00000401607 GALNT6Q8NCL4 622 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms