RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 RNF138Q8WVD3 245 aa17.81■□□□□ 0.44
AC008060.1-201ENST00000401499 DNAJC9Q8WXX5 260 aa17.81■□□□□ 0.44
AC008060.1-201ENST00000401499 SLC35B4Q969S0 331 aa17.81■□□□□ 0.44
AC008060.1-201ENST00000401499 SDCCAG3Q96C92 435 aa17.81■□□□□ 0.44
AC008060.1-201ENST00000401499 ZNF597Q96LX8 424 aa17.81■□□□□ 0.44
AC008060.1-201ENST00000401499 OSBPL10Q9BXB5 764 aa17.81■□□□□ 0.44
AC008060.1-201ENST00000401499 VCXQ9H320 206 aa17.81■□□□□ 0.44
AC008060.1-201ENST00000401499 WASF3Q9UPY6 502 aa17.81■□□□□ 0.44
AC008060.1-201ENST00000401499 CELSR3Q9NYQ7 3312 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 FMO6PO60774 539 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 UBL4AP11441 157 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 ALDH3A2P51648 485 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 CLN3Q13286 438 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 SKP2Q13309 424 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 SEC23BQ15437 767 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 NTRK2Q16620 822 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 DCAF10Q5QP82 559 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 H3F3CQ6NXT2 135 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 CBLN3Q6UW01 205 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 PLEKHM3Q6ZWE6 761 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 RPS19BP1Q86WX3 136 aaKnown RBP17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 PHOSPHO1Q8TCT1 267 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 SPACA9Q96E40 222 aaPredicted RBP17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 ALPK1Q96QP1 1244 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 FNDC11Q9BVV2 318 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 C8orf4Q9NR00 106 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 WDR70Q9NW82 654 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 USE1Q9NZ43 259 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 YARS2Q9Y2Z4 477 aaKnown RBP17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 LRRC42Q9Y546 428 aa17.8■□□□□ 0.44
AC008060.1-201ENST00000401499 A0A1W2PRQ8 180 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 H0YJX3 145 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 CYP7B1O75881 506 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 OR6B1O95007 311 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 WT1P19544 449 aaPredicted RBP17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 TMED10P49755 219 aaKnown RBP17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 ARHGDIAP52565 204 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 DGCR6Q14129 220 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 OR1Q1Q15612 314 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 MICAQ29983 383 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 ZNF791Q3KP31 576 aaPredicted RBP17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 FGD3Q5JSP0 725 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 NUP54Q7Z3B4 507 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 SIRT6Q8N6T7 355 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 OR10G3Q8NGC4 313 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 SLC7A13Q8TCU3 470 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 BRIX1Q8TDN6 353 aaKnown RBP17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 PSMF1Q92530 271 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 NR4A3Q92570 626 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 IP6K3Q96PC2 410 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 KLHDC3Q9BQ90 382 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 TBL1XR1Q9BZK7 514 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 TMEFF2Q9UIK5 374 aaPredicted RBP17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 CARD8Q9Y2G2 431 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 C15orf41Q9Y2V0 281 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 MED13Q9UHV7 2174 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 ZNF264O43296 627 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 SCO2O43819 266 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 OR5F1O95221 314 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 LYPD3O95274 346 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 NTN1O95631 604 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 ANGPTL1O95841 491 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 HPRP00739 348 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 DAPP51397 102 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 ZNF117Q03924 483 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 EPS8Q12929 822 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 GK3PQ14409 553 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 B3GNTL1Q67FW5 361 aaPredicted RBP17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 ZNF550Q7Z398 422 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 GDF7Q7Z4P5 450 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 SLC5A8Q8N695 610 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 OR10G2Q8NGC3 310 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 OR9Q2Q8NGE9 314 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 GIPC3Q8TF64 312 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 TTC9Q92623 222 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 SLC41A3Q96GZ6 507 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 RBM4BQ9BQ04 359 aaKnown RBP17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 RBM4Q9BWF3 364 aaKnown RBP17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 SCNM1Q9BWG6 230 aa17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 POLR2J2Q9GZM3 115 aaKnown RBP17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 POLR2J3Q9H1A7 115 aaKnown RBP17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 EXOSC3Q9NQT5 275 aaKnown RBP17.79■□□□□ 0.44
AC008060.1-201ENST00000401499 PCNX3Q9H6A9 2034 aa17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 CPAMD8Q8IZJ3 1885 aa17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 EML6Q6ZMW3 1958 aa17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 NDUFB5O43674 189 aa17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 SSR4P51571 173 aa17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 SMIM11AP58511 58 aa17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 LSM11P83369 360 aaKnown RBP eCLIP17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 BICRALQ6AI39 1079 aa17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 ZNF770Q6IQ21 691 aaPredicted RBP17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 FAHD1Q6P587 224 aa17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 TMCO6Q96DC7 493 aa17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 THOC3Q96J01 351 aaKnown RBP17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 PSD2Q9BQI7 771 aa17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 ZNF559Q9BR84 538 aa17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 ZFHX4Q86UP3 3567 aa17.78■□□□□ 0.44
AC008060.1-201ENST00000401499 SPTBN4Q9H254 2564 aa17.77■□□□□ 0.44
AC008060.1-201ENST00000401499 H3BNH8 94 aa17.77■□□□□ 0.44
AC008060.1-201ENST00000401499 GTPBP1O00178 669 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms