RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 UBTFL6P0CB48 400 aaPredicted RBP14.52□□□□□ -0.09
HMGA1-204ENST00000401473 GGT1P19440 569 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 MASP1P48740 699 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 RASSF2P50749 326 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 ZNF117Q03924 483 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 HYAL4Q2M3T9 481 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 DNAL1Q4LDG9 190 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 PRR30Q53SZ7 412 aaPredicted RBP14.52□□□□□ -0.09
HMGA1-204ENST00000401473 INTS11Q5TA45 600 aaKnown RBP14.52□□□□□ -0.09
HMGA1-204ENST00000401473 GLYATQ6IB77 296 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 PGM2L1Q6PCE3 622 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 ZNF836Q6ZNA1 936 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 ASRGL1Q7L266 308 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 KRT73Q86Y46 540 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 PLCZ1Q86YW0 608 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 SLC30A8Q8IWU4 369 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 ARHGAP24Q8N264 748 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 FADS6Q8N9I5 356 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 WDR60Q8WVS4 1066 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 SNRNP40Q96DI7 357 aaKnown RBP14.52□□□□□ -0.09
HMGA1-204ENST00000401473 UBQLN3Q9H347 655 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 DSN1Q9H410 356 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.52□□□□□ -0.09
HMGA1-204ENST00000401473 PPP4R1LQ9P1A2 415 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 ICAM5Q9UMF0 924 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 ZNF232Q9UNY5 417 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 IFT52Q9Y366 437 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 SHANK1Q9Y566 2161 aa14.52□□□□□ -0.09
HMGA1-204ENST00000401473 IGLV3-32A0A0A0MS00 114 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 GTPBP1O00178 669 aaKnown RBP14.51□□□□□ -0.09
HMGA1-204ENST00000401473 ZNF264O43296 627 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 HCRTR2O43614 444 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 SERPINB7O75635 380 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 DNAJC8O75937 253 aaPredicted RBP14.51□□□□□ -0.09
HMGA1-204ENST00000401473 EIF3MQ7L2H7 374 aaKnown RBP14.51□□□□□ -0.09
HMGA1-204ENST00000401473 PATL1Q86TB9 770 aaKnown RBP14.51□□□□□ -0.09
HMGA1-204ENST00000401473 ARMC8Q8IUR7 673 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 TMEM251Q8N6I4 163 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 FAM71CQ8NEG0 241 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 OR2M3Q8NG83 312 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 GPR32P1Q8NGA4 272 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 OR10Q1Q8NGQ4 319 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 OIT3Q8WWZ8 545 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 ZNF597Q96LX8 424 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 SDHAF3Q9NRP4 125 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 SEC14L3Q9UDX4 400 aa14.51□□□□□ -0.09
HMGA1-204ENST00000401473 BOKQ9UMX3 212 aaPredicted RBP14.51□□□□□ -0.09
HMGA1-204ENST00000401473 FAM166BA8MTA8 275 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 H3BNH8 94 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 CBR3O75828 277 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 CELA3AP09093 270 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 UBL4AP11441 157 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 ELAVL4P26378 380 aaKnown RBP14.5□□□□□ -0.09
HMGA1-204ENST00000401473 MAGEA5P43359 124 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 PPIAP62937 165 aaKnown RBP14.5□□□□□ -0.09
HMGA1-204ENST00000401473 SKP2Q13309 424 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 LARS2Q15031 903 aaKnown RBP14.5□□□□□ -0.09
HMGA1-204ENST00000401473 SPATS1Q496A3 300 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 MISPQ8IVT2 679 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 LRMDAQ9H2I8 198 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 DNAJB12Q9NXW2 375 aaKnown RBP14.5□□□□□ -0.09
HMGA1-204ENST00000401473 ANAPC2Q9UJX6 822 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 POLEQ07864 2286 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 GSTA4O15217 222 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 SUV39H1O43463 412 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 CYP7B1O75881 506 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 PDE9AO76083 593 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 WISP1O95388 367 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 GKN3PP0CG01 181 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 ME2P23368 584 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 PRKAR1BP31321 381 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 KCNJ5P48544 419 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 MLLT10P55197 1068 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 FOXK1P85037 733 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 TRIM25Q14258 630 aaKnown RBP14.5□□□□□ -0.09
HMGA1-204ENST00000401473 TOMM34Q15785 309 aaPredicted RBP14.5□□□□□ -0.09
HMGA1-204ENST00000401473 LIN52Q52LA3 116 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 LRRC23Q53EV4 343 aaPredicted RBP14.5□□□□□ -0.09
HMGA1-204ENST00000401473 RNF220Q5VTB9 566 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 FAM98AQ8NCA5 519 aaKnown RBP14.5□□□□□ -0.09
HMGA1-204ENST00000401473 NPAS1Q99742 590 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 SPATA5L1Q9BVQ7 753 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 LAT2Q9GZY6 243 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 TSPAN10Q9H1Z9 355 aaPredicted RBP14.5□□□□□ -0.09
HMGA1-204ENST00000401473 ZNF703Q9H7S9 590 aaPredicted RBP14.5□□□□□ -0.09
HMGA1-204ENST00000401473 GORASP2Q9H8Y8 452 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 SLC35A3Q9Y2D2 325 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 C15orf41Q9Y2V0 281 aa14.5□□□□□ -0.09
HMGA1-204ENST00000401473 FRS3O43559 492 aa14.49□□□□□ -0.09
HMGA1-204ENST00000401473 ZIC3O60481 467 aa14.49□□□□□ -0.09
HMGA1-204ENST00000401473 PRG2P13727 222 aa14.49□□□□□ -0.09
HMGA1-204ENST00000401473 CD247P20963 164 aa14.49□□□□□ -0.09
HMGA1-204ENST00000401473 MST1P26927 711 aa14.49□□□□□ -0.09
HMGA1-204ENST00000401473 PLGLB1Q02325 96 aa14.49□□□□□ -0.09
HMGA1-204ENST00000401473 ZNF324BQ6AW86 544 aaPredicted RBP14.49□□□□□ -0.09
HMGA1-204ENST00000401473 DHRS4L2Q6PKH6 230 aa14.49□□□□□ -0.09
HMGA1-204ENST00000401473 ARSKQ6UWY0 536 aa14.49□□□□□ -0.09
HMGA1-204ENST00000401473 GRAMD2AQ8IUY3 354 aa14.49□□□□□ -0.09
HMGA1-204ENST00000401473 CMIPQ8IY22 773 aa14.49□□□□□ -0.09
HMGA1-204ENST00000401473 TNIP2Q8NFZ5 429 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms