RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 OPN1SWP03999 348 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 SPP1P10451 314 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 EPCAMP16422 314 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 TACR1P25103 407 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 ATP6V1E1P36543 226 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 SPAM1P38567 509 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 FNTBP49356 437 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 CAPZA1P52907 286 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 CRYBA2P53672 197 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 EEF1A1P68104 462 aaKnown RBP9.26□□□□□ -0.93
APTX-207ENST00000397172 EEF1A2Q05639 463 aaKnown RBP9.26□□□□□ -0.93
APTX-207ENST00000397172 SLC3A1Q07837 685 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 EIF4EBP2Q13542 120 aaPredicted RBP9.26□□□□□ -0.93
APTX-207ENST00000397172 DDX39BQ13838 428 aaKnown RBP9.26□□□□□ -0.93
APTX-207ENST00000397172 KLF9Q13886 244 aaPredicted RBP9.26□□□□□ -0.93
APTX-207ENST00000397172 ARHGEF7Q14155 803 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 DOC2BQ14184 412 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 GINS1Q14691 196 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 C18orf21Q32NC0 220 aaPredicted RBP9.26□□□□□ -0.93
APTX-207ENST00000397172 NKAPLQ5M9Q1 402 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 OR2G6Q5TZ20 316 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 EEF1A1P5Q5VTE0 462 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 FAM111BQ6SJ93 734 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 WDR53Q7Z5U6 358 aaPredicted RBP9.26□□□□□ -0.93
APTX-207ENST00000397172 ZBTB2Q8N680 514 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 OR14A16Q8NHC5 309 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 SMIM4Q8WVI0 70 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 ASZ1Q8WWH4 475 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 PSMG2Q969U7 264 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 TRMT2BQ96GJ1 504 aaKnown RBP9.26□□□□□ -0.93
APTX-207ENST00000397172 APIPQ96GX9 242 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 ZC3H10Q96K80 434 aaKnown RBP9.26□□□□□ -0.93
APTX-207ENST00000397172 SLC6A18Q96N87 628 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 MRI1Q9BV20 369 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 MFFQ9GZY8 342 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 FXYD6Q9H0Q3 95 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 MED17Q9NVC6 651 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 ELOVL2Q9NXB9 296 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 H2AFY2Q9P0M6 372 aaPredicted RBP9.26□□□□□ -0.93
APTX-207ENST00000397172 VPS29Q9UBQ0 182 aa9.26□□□□□ -0.93
APTX-207ENST00000397172 YARS2Q9Y2Z4 477 aaKnown RBP9.26□□□□□ -0.93
APTX-207ENST00000397172 MYBPHLA2RUH7 354 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 PMS2P1A4D2B8 440 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 DBX1A6NMT0 343 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 TMEM229AB2RXF0 380 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 HHLA1C9JL84 531 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 PRRG1O14668 218 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 RNF13O43567 381 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 PCDH7O60245 1069 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 RDH16O75452 317 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 SOX14O95416 240 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 IL3P08700 152 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 CHRM5P08912 532 aaPredicted RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 HNRNPA1P09651 372 aaKnown RBP eCLIP9.25□□□□□ -0.93
APTX-207ENST00000397172 OR4Q2P0C623 313 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 PTAFRP25105 342 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 ATP5A1P25705 553 aaKnown RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 GIPRP48546 466 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 SRP9P49458 86 aaKnown RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 MECP2P51608 486 aaKnown RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 CCR6P51684 374 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 DCDP81605 110 aaKnown RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 LBHQ53QV2 105 aaPredicted RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 LIPJQ5W064 366 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 SLC6A19Q695T7 634 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 ZNF660Q6AZW8 331 aaPredicted RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 REEP3Q6NUK4 255 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 SLC30A6Q6NXT4 461 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 ZNF783Q6ZMS7 281 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 MOB3CQ70IA8 216 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 BHLHA9Q7RTU4 235 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 SPATA2LQ8IUW3 424 aaPredicted RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 CFAP206Q8IYR0 622 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 CLECL1Q8IZS7 167 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 GJD3Q8N144 294 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 ZNF561Q8N587 486 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 POGLUT1Q8NBL1 392 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 TMEM185AQ8NFB2 350 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 VN1R2Q8NFZ6 395 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 MAFAQ8NHW3 353 aaPredicted RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 ZFPM2Q8WW38 1151 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 HSD17B8Q92506 261 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 MAL2Q969L2 176 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 PCED1BQ96HM7 432 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 C19orf43Q9BQ61 176 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 UTP23Q9BRU9 249 aaKnown RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 SFXN1Q9H9B4 322 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 TRIM36Q9NQ86 728 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 CLDND1Q9NY35 253 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 NKIRAS2Q9NYR9 191 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 PPP4R1LQ9P1A2 415 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 KLHL9Q9P2J3 617 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 ZNF629Q9UEG4 869 aaPredicted RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 PCOLCE2Q9UKZ9 415 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 RASD1Q9Y272 281 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 FNDC3AQ9Y2H6 1198 aaKnown RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 CARHSP1Q9Y2V2 147 aaKnown RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 CHST2Q9Y4C5 530 aa9.25□□□□□ -0.93
APTX-207ENST00000397172 MTCL1Q9Y4B5 1905 aaKnown RBP9.25□□□□□ -0.93
APTX-207ENST00000397172 A0A1B0GTQ1 180 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms