RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 A0A1B0GUH1 482 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 BBIP1A8MTZ0 92 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 COX4I1P13073 169 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 GPX2P18283 190 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 MSX1P28360 303 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 CCR4P51679 360 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 COQ5Q5HYK3 327 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 NHSL2Q5HYW2 709 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 AP1ARQ63HQ0 302 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 NFKBIDQ8NI38 313 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 TREX2Q9BQ50 279 aaPredicted RBP18.04■□□□□ 0.48
SNCA-203ENST00000394986 THUMPD3Q9BV44 507 aaKnown RBP18.04■□□□□ 0.48
SNCA-203ENST00000394986 MED17Q9NVC6 651 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 THUMPD1Q9NXG2 353 aaKnown RBP18.04■□□□□ 0.48
SNCA-203ENST00000394986 ICAM5Q9UMF0 924 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 MRPS18CQ9Y3D5 142 aaKnown RBP18.04■□□□□ 0.48
SNCA-203ENST00000394986 DSPPQ9NZW4 1301 aa18.04■□□□□ 0.48
SNCA-203ENST00000394986 OR2M5A3KFT3 312 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 AGAP5A6NIR3 686 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 ZNF264O43296 627 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 NUDT14O95848 222 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 CSTAP01040 98 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 ARAFP10398 606 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 RPS4Y1P22090 263 aaKnown RBP18.03■□□□□ 0.48
SNCA-203ENST00000394986 P2RX1P51575 399 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 SKP2Q13309 424 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 TOMM34Q15785 309 aaPredicted RBP18.03■□□□□ 0.48
SNCA-203ENST00000394986 ADRM1Q16186 407 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 RABL3Q5HYI8 236 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 EIF3MQ7L2H7 374 aaKnown RBP18.03■□□□□ 0.48
SNCA-203ENST00000394986 VRK2Q86Y07 508 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 ZNF524Q96C55 264 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 LRRC58Q96CX6 371 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 DTNBP1Q96EV8 351 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 CCDC120Q96HB5 630 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 CCT8L2Q96SF2 557 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 MTHFD2LQ9H903 347 aaPredicted RBP18.03■□□□□ 0.48
SNCA-203ENST00000394986 CALML5Q9NZT1 146 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 ADAM21Q9UKJ8 722 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 CORO2BQ9UQ03 480 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 CAMK2AQ9UQM7 478 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 ARL2BPQ9Y2Y0 163 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 MEMO1Q9Y316 297 aa18.03■□□□□ 0.48
SNCA-203ENST00000394986 LRRK2Q5S007 2527 aa18.02■□□□□ 0.48
SNCA-203ENST00000394986 DNAJC13O75165 2243 aa18.02■□□□□ 0.48
SNCA-203ENST00000394986 TMEM247A6NEH6 219 aa18.02■□□□□ 0.48
SNCA-203ENST00000394986 KDM4EB2RXH2 506 aaPredicted RBP18.02■□□□□ 0.48
SNCA-203ENST00000394986 SHOX2O60902 331 aaPredicted RBP18.02■□□□□ 0.48
SNCA-203ENST00000394986 LDLRP01130 860 aa18.02■□□□□ 0.48
SNCA-203ENST00000394986 ESRRAP11474 423 aaPredicted RBP18.02■□□□□ 0.48
SNCA-203ENST00000394986 GCKP35557 465 aa18.02■□□□□ 0.48
SNCA-203ENST00000394986 PGM1P36871 562 aa18.02■□□□□ 0.48
SNCA-203ENST00000394986 ZNF41P51814 821 aaPredicted RBP18.02■□□□□ 0.48
SNCA-203ENST00000394986 PLPPR5Q32ZL2 321 aa18.02■□□□□ 0.48
SNCA-203ENST00000394986 RTL6Q6ICC9 239 aa18.02■□□□□ 0.48
SNCA-203ENST00000394986 MARVELD2Q8N4S9 558 aa18.02■□□□□ 0.48
SNCA-203ENST00000394986 RP9Q8TA86 221 aaKnown RBP18.02■□□□□ 0.48
SNCA-203ENST00000394986 WDR60Q8WVS4 1066 aa18.02■□□□□ 0.48
SNCA-203ENST00000394986 WDYHV1Q96HA8 205 aa18.02■□□□□ 0.48
SNCA-203ENST00000394986 TP63Q9H3D4 680 aaPredicted RBP18.02■□□□□ 0.48
SNCA-203ENST00000394986 SUCOQ9UBS9 1254 aaKnown RBP18.02■□□□□ 0.48
SNCA-203ENST00000394986 ZNF337Q9Y3M9 751 aa18.02■□□□□ 0.48
SNCA-203ENST00000394986 MED12Q93074 2177 aa18.02■□□□□ 0.47
SNCA-203ENST00000394986 C5orf58C9J3I9 102 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 H3BML4 177 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 EIF4E2O60573 245 aaKnown RBP18.01■□□□□ 0.47
SNCA-203ENST00000394986 ZG16O60844 167 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 ACTL6AO96019 429 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 DBIP07108 87 aaKnown RBP18.01■□□□□ 0.47
SNCA-203ENST00000394986 ACVR2AP27037 513 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 ADH7P40394 386 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 LHX2P50458 406 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 KCNJ10P78508 379 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 CDK6Q00534 326 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 SRYQ05066 204 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 FOXF1Q12946 379 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 CYP51A1Q16850 503 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 TMEM44Q2T9K0 475 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 NANOGP8Q6NSW7 305 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 AAGABQ6PD74 315 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 LSRQ86X29 649 aaPredicted RBP18.01■□□□□ 0.47
SNCA-203ENST00000394986 PTOV1Q86YD1 416 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 PEX5LQ8IYB4 626 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 ULK2Q8IYT8 1036 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 PCYOX1LQ8NBM8 494 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 FAM71CQ8NEG0 241 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 POC1BQ8TC44 478 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 GPR119Q8TDV5 335 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 CNOT9Q92600 299 aaKnown RBP18.01■□□□□ 0.47
SNCA-203ENST00000394986 DMRTA2Q96SC8 542 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 PRDM14Q9GZV8 571 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 LAT2Q9GZY6 243 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 KAT8Q9H7Z6 458 aaKnown RBP18.01■□□□□ 0.47
SNCA-203ENST00000394986 NANOGQ9H9S0 305 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 HHATLQ9HCP6 504 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.01■□□□□ 0.47
SNCA-203ENST00000394986 FAM215AQ9Y5M1 114 aa18.01■□□□□ 0.47
SNCA-203ENST00000394986 A0A087WZY1 265 aa18■□□□□ 0.47
SNCA-203ENST00000394986 A0A0G2JPF8 293 aa18■□□□□ 0.47
SNCA-203ENST00000394986 FIGNL2A6NMB9 653 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms