RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 SSR3Q9UNL2 185 aa14.24□□□□□ -0.13
CPSF7-202ENST00000394888 EXPH5Q8NEV8 1989 aa14.24□□□□□ -0.13
CPSF7-202ENST00000394888 NKX2-5P52952 324 aaPredicted RBP14.24□□□□□ -0.13
CPSF7-202ENST00000394888 FZD2Q14332 565 aa14.24□□□□□ -0.13
CPSF7-202ENST00000394888 OR52N1Q8NH53 320 aa14.24□□□□□ -0.13
CPSF7-202ENST00000394888 SMAP2Q8WU79 429 aaPredicted RBP14.24□□□□□ -0.13
CPSF7-202ENST00000394888 SLC22A18Q96BI1 424 aa14.24□□□□□ -0.13
CPSF7-202ENST00000394888 ST6GAL2Q96JF0 529 aa14.24□□□□□ -0.13
CPSF7-202ENST00000394888 PCNX3Q9H6A9 2034 aa14.24□□□□□ -0.13
CPSF7-202ENST00000394888 A0A0G2JK05 382 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 DUXAA6NLW8 204 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 B3GALT2O43825 422 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 P2RY14Q15391 338 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 MTSS1LQ765P7 747 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 SSX6Q7RTT6 188 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 OR10G6Q8NH81 332 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 DNAJB12Q9NXW2 375 aaKnown RBP14.23□□□□□ -0.13
CPSF7-202ENST00000394888 CRNNQ9UBG3 495 aaPredicted RBP14.23□□□□□ -0.13
CPSF7-202ENST00000394888 TMEM184BQ9Y519 407 aaPredicted RBP14.23□□□□□ -0.13
CPSF7-202ENST00000394888 FREM2Q5SZK8 3169 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 A0A0B4J2E0 115 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 A0A1B0GX12 115 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 GSAPA4D1B5 854 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 GPR75O95800 540 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 SLC9A3P48764 834 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 SPANXN2Q5MJ10 180 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 FIGNL1Q6PIW4 674 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 SMARCD3Q6STE5 483 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 GJD3Q8N144 294 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 Q8N9G6 341 aaPredicted RBP14.23□□□□□ -0.13
CPSF7-202ENST00000394888 SETD6Q8TBK2 473 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 RNF170Q96K19 258 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 PIAS3Q9Y6X2 628 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 COL6A3P12111 3177 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 SGK494L7N484 410 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 GABRPO00591 440 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 POLR1CO15160 346 aaPredicted RBP14.23□□□□□ -0.13
CPSF7-202ENST00000394888 FMO6PO60774 539 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 ST6GAL1P15907 406 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 EFNA3P52797 238 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 ZNF85Q03923 595 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 SFSWAPQ12872 951 aaKnown RBP14.23□□□□□ -0.13
CPSF7-202ENST00000394888 ASAH1Q13510 395 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 AGAP6Q5VW22 663 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 HSDL2Q6YN16 418 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 NUDT18Q6ZVK8 323 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 OR13C2Q8NGS9 318 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 CNOT9Q92600 299 aaKnown RBP14.23□□□□□ -0.13
CPSF7-202ENST00000394888 AGAP4Q96P64 663 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 LMF2Q9BU23 707 aaKnown RBP14.23□□□□□ -0.13
CPSF7-202ENST00000394888 MCCC2Q9HCC0 563 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 TIGARQ9NQ88 270 aa14.23□□□□□ -0.13
CPSF7-202ENST00000394888 NDRG2Q9UN36 371 aaKnown RBP14.23□□□□□ -0.13
CPSF7-202ENST00000394888 GCGRP47871 477 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 YPEL5P62699 121 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 IGLV3-21P80748 117 aaPredicted RBP14.22□□□□□ -0.13
CPSF7-202ENST00000394888 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.22□□□□□ -0.13
CPSF7-202ENST00000394888 ZNF542PQ5EBM4 170 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 PEX11GQ96HA9 241 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 PGLYRP3Q96LB9 341 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 DDOQ99489 341 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 ADGRL4Q9HBW9 690 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 TRAPPC13A5PLN9 417 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 DLGAP3O95886 979 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 RIN1Q13671 783 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 PLBD1Q6P4A8 553 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 ZC3H14Q6PJT7 736 aaKnown RBP14.22□□□□□ -0.13
CPSF7-202ENST00000394888 LAPTM4BQ86VI4 370 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 SMRP1Q8NCR6 262 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 TOR1AIP2Q8NFQ8 470 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 OR2T33Q8NG76 320 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 TMEM239Q8WW34 195 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 KCNJ15Q99712 375 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 CHRDQ9H2X0 955 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 SNPHO15079 494 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 AZGP1P25311 298 aaKnown RBP14.22□□□□□ -0.13
CPSF7-202ENST00000394888 MRPS21P82921 87 aaKnown RBP14.22□□□□□ -0.13
CPSF7-202ENST00000394888 RDH10Q8IZV5 341 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 VSTM2LQ96N03 204 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 KLHDC3Q9BQ90 382 aa14.22□□□□□ -0.13
CPSF7-202ENST00000394888 C11orf54Q9H0W9 315 aaPredicted RBP14.22□□□□□ -0.13
CPSF7-202ENST00000394888 TCRBV21S2A2A0A5A6 115 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 OR2W5A6NFC9 320 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 UNC119BA6NIH7 251 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 LRRC72A6NJI9 287 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 H3BMH7 237 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 STX11O75558 287 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 AGR2O95994 175 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 NR4A2P43354 598 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 PRTGQ2VWP7 1150 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 TMPRSS11AQ6ZMR5 421 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 ABHD13Q7L211 337 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 CTRCQ99895 268 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 HDHD5Q9BXW7 423 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 ADAP2Q9NPF8 381 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 POT1Q9NUX5 634 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 ICAM5Q9UMF0 924 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 HS3ST3A1Q9Y663 406 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 A0A0J9YY10 115 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 DYRK3O43781 588 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms