RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 PRAMEF8Q5VWM4 474 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 PRAMEF7Q5VXH5 474 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 DHRS4L2Q6PKH6 230 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 OR51L1Q8NGJ5 315 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 OR52I1Q8NGK6 324 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 TRUB1Q8WWH5 349 aaKnown RBP10.31□□□□□ -0.76
TCOF1-203ENST00000394269 DTNBP1Q96EV8 351 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 CRELD1Q96HD1 420 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 CD180Q99467 661 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 OR10A5Q9H207 317 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 Q9N2J8 555 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 RPS6KB2Q9UBS0 482 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 MUTYHQ9UIF7 546 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 E9PQ18 207 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 SOCS6O14544 535 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 BRINP1O60477 761 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 PDGFBP01127 241 aaPredicted RBP10.3□□□□□ -0.76
TCOF1-203ENST00000394269 MRPL3P09001 348 aaKnown RBP10.3□□□□□ -0.76
TCOF1-203ENST00000394269 PRTGQ2VWP7 1150 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 PRPF38BQ5VTL8 546 aaKnown RBP10.3□□□□□ -0.76
TCOF1-203ENST00000394269 MBOAT2Q6ZWT7 520 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 CYP4Z2PQ8N1L4 340 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 LINC00471Q8N535 108 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 POLDIP3Q9BY77 421 aaKnown RBP10.3□□□□□ -0.76
TCOF1-203ENST00000394269 NUAK2Q9H093 628 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 OR52D1Q9H346 318 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 HHATLQ9HCP6 504 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 CNOT2Q9NZN8 540 aaKnown RBP10.3□□□□□ -0.76
TCOF1-203ENST00000394269 A0A087WV62 115 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 COQ9O75208 318 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 REM1O75628 298 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 PIAS2O75928 621 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 OR5F1O95221 314 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 HBQ1P09105 142 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 BMP4P12644 408 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 PSMA1P25786 263 aaKnown RBP10.3□□□□□ -0.76
TCOF1-203ENST00000394269 CD79BP40259 229 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 AFF3P51826 1226 aaKnown RBP10.3□□□□□ -0.76
TCOF1-203ENST00000394269 NXPH1P58417 271 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 CDK5Q00535 292 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 CRYZQ08257 329 aaKnown RBP10.3□□□□□ -0.76
TCOF1-203ENST00000394269 DNASE1L3Q13609 305 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 ZNF791Q3KP31 576 aaPredicted RBP10.3□□□□□ -0.76
TCOF1-203ENST00000394269 ALG10BQ5I7T1 473 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 CROCCP3Q8IVE0 287 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 SLC35F3Q8IY50 421 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 GJD3Q8N144 294 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 SLC25A45Q8N413 288 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 OR2T33Q8NG76 320 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 OR52L1Q8NGH7 329 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 OSTF1Q92882 214 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 BPIFA2Q96DR5 249 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 SENP5Q96HI0 755 aaPredicted RBP10.3□□□□□ -0.76
TCOF1-203ENST00000394269 PSD2Q9BQI7 771 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 RACGAP1Q9H0H5 632 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 SLC25A19Q9HC21 320 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 CUTCQ9NTM9 273 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 FKBP14Q9NWM8 211 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 SIDT1Q9NXL6 827 aaKnown RBP10.3□□□□□ -0.76
TCOF1-203ENST00000394269 DAPK2Q9UIK4 370 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 SLC35F4A4IF30 521 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 TLCD2A6NGC4 264 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 GPX5O75715 221 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 CSTAP01040 98 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 S100A5P33763 92 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 SSX1Q16384 188 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 DECR1Q16698 335 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 ZNF404Q494X3 552 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 SLC36A4Q6YBV0 504 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 SPEM1Q8N4L4 309 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 TMEM163Q8TC26 289 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 FANK1Q8TC84 345 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 FNDC8Q8TC99 324 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 TM9SF2Q99805 663 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 NUDT22Q9BRQ3 303 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 CDCA4Q9BXL8 241 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 UBQLN3Q9H347 655 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 MED31Q9Y3C7 131 aa10.3□□□□□ -0.76
TCOF1-203ENST00000394269 A0A1B0GWA3 101 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 UNC119BA6NIH7 251 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 OCM2P0CE71 109 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 OCMP0CE72 109 aaPredicted RBP10.29□□□□□ -0.76
TCOF1-203ENST00000394269 FOLR1P15328 257 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 MAGEA8P43361 318 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 GRM7Q14831 915 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 NSDHLQ15738 373 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 RASSF6Q6ZTQ3 369 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 ZNF367Q7RTV3 350 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 FAM26EQ8N5C1 309 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 C9orf43Q8TAL5 461 aaPredicted RBP10.29□□□□□ -0.76
TCOF1-203ENST00000394269 THAP3Q8WTV1 239 aaPredicted RBP10.29□□□□□ -0.76
TCOF1-203ENST00000394269 OPALINQ96PE5 141 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 SECISBP2Q96T21 854 aaKnown RBP10.29□□□□□ -0.76
TCOF1-203ENST00000394269 MND1Q9BWT6 205 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 SLIRPQ9GZT3 109 aaKnown RBP10.29□□□□□ -0.76
TCOF1-203ENST00000394269 SNTNA6NMZ2 147 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 KHNYNO15037 678 aaKnown RBP10.29□□□□□ -0.76
TCOF1-203ENST00000394269 RFPL3O75679 317 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 SLITRK5O94991 958 aa10.29□□□□□ -0.76
TCOF1-203ENST00000394269 NSA2O95478 260 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms