RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 KIAA1143Q96AT1 154 aaPredicted RBP6.67□□□□□ -1.34
SMAD1-202ENST00000394092 C1GALT1C1Q96EU7 318 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 TCTN2Q96GX1 697 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 RBM18Q96H35 190 aaKnown RBP6.67□□□□□ -1.34
SMAD1-202ENST00000394092 SAMD8Q96LT4 415 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 DGAT2Q96PD7 388 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 SECISBP2Q96T21 854 aaKnown RBP6.67□□□□□ -1.34
SMAD1-202ENST00000394092 GPR174Q9BXC1 333 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 DPH1Q9BZG8 443 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 KCNN2Q9H2S1 579 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 UBQLN3Q9H347 655 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 FOLH1BQ9HBA9 442 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 Q9N2J8 555 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 CMC2Q9NRP2 79 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 ASB6Q9NWX5 421 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 TOR4AQ9NXH8 423 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF223Q9UK11 482 aaPredicted RBP6.67□□□□□ -1.34
SMAD1-202ENST00000394092 ADAM30Q9UKF2 790 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 CBLCQ9ULV8 474 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 NDRG2Q9UN36 371 aaKnown RBP6.67□□□□□ -1.34
SMAD1-202ENST00000394092 CARD8Q9Y2G2 431 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 NTNG1Q9Y2I2 539 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 TP53BP1Q12888 1972 aaPredicted RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 A0A0B4J2E0 115 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 CENPVL1A0A0U1RR11 272 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 A0A1B0GX12 115 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 CHURC1-FNTBB4DL54 471 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 PRR23D1E9PI22 279 aaPredicted RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 BHLHE40O14503 412 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 CTDSP2O14595 271 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 CDC42EP2O14613 210 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF749O43361 778 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 DNAJB6O75190 326 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 KCNK2O95069 426 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 NSA2O95478 260 aaKnown RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 IFNGP01579 166 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 CELA2BP08218 269 aaPredicted RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 CT62P0C5K7 136 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 GKN3PP0CG01 181 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 PRR23D2P0DMB1 279 aaPredicted RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 SAGP10523 405 aaPredicted RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF3P17036 446 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 TYRP1P17643 537 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 CD53P19397 219 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 DRD5P21918 477 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 GTF2E2P29084 291 aaKnown RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 SLC6A6P31641 620 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 SDC2P34741 201 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 MLLT3P42568 568 aaPredicted RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 TAS2R43P59537 309 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 RPS25P62851 125 aaKnown RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 PPP3R1P63098 170 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 SNRPNP63162 240 aaKnown RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 ACTC1P68032 377 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 ACTA1P68133 377 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 IGLV3-21P80748 117 aaPredicted RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 POU4F2Q12837 409 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 HNRNPA0Q13151 305 aaKnown RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 FAM53BQ14153 422 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 DOC2BQ14184 412 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 TRAM1Q15629 374 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 MAPK14Q16539 360 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 LRIT3Q3SXY7 679 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF542PQ5EBM4 170 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 TCTE1Q5JU00 501 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 PRPF38BQ5VTL8 546 aaKnown RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 ARHGAP11AQ6P4F7 1023 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 MEPCEQ7L2J0 689 aaKnown RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 CPOQ8IVL8 374 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 MCATQ8IVS2 390 aaKnown RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 GPALPP1Q8IXQ4 340 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 TMEFF1Q8IYR6 380 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 CADM3Q8N126 398 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF614Q8N883 585 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 ZBTB8BQ8NAP8 495 aaPredicted RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 SIMC1Q8NDZ2 872 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 FAM83FQ8NEG4 500 aaPredicted RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 OR9A4Q8NGU2 314 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 HTRA1Q92743 480 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 RIT1Q92963 219 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 BPIFA2Q96DR5 249 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 TRMT61AQ96FX7 289 aaKnown RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 TXNDC15Q96J42 360 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 LRRC61Q9BV99 259 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 IFT27Q9BW83 186 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 PCED1AQ9H1Q7 454 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF576Q9H609 170 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 TRIM36Q9NQ86 728 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 HINT3Q9NQE9 182 aaKnown RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 POLE4Q9NR33 117 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 PRTFDC1Q9NRG1 225 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 TMEM74BQ9NUR3 256 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 IRAK4Q9NWZ3 460 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 ERVK13-1Q9NX77 482 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 RPS6KB2Q9UBS0 482 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 EPHA6Q9UF33 1036 aa6.66□□□□□ -1.34
SMAD1-202ENST00000394092 PAIP2BQ9ULR5 123 aaKnown RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 SF3B6Q9Y3B4 125 aaKnown RBP6.66□□□□□ -1.34
SMAD1-202ENST00000394092 CSNK1G3Q9Y6M4 447 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms