RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 DUSP15Q9H1R2 295 aaPredicted RBP13.2□□□□□ -0.3
RNF41-202ENST00000394013 HHATLQ9HCP6 504 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 OR10H1Q9Y4A9 318 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 NCOR1O75376 2440 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 CNOT3O75175 753 aaKnown RBP13.2□□□□□ -0.3
RNF41-202ENST00000394013 FPR3P25089 353 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 HSD11B2P80365 405 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 TEKQ02763 1124 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 EIPR1Q53HC9 387 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 PERM1Q5SV97 790 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 GUSBP11Q6P575 273 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 ZNF574Q6ZN55 896 aaPredicted RBP13.2□□□□□ -0.3
RNF41-202ENST00000394013 ATCAYQ86WG3 371 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 RNFT2Q96EX2 444 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 TMEM80Q96HE8 168 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 SENP5Q96HI0 755 aaPredicted RBP13.2□□□□□ -0.3
RNF41-202ENST00000394013 RTN4RQ9BZR6 473 aa13.2□□□□□ -0.3
RNF41-202ENST00000394013 SLIRPQ9GZT3 109 aaKnown RBP13.2□□□□□ -0.3
RNF41-202ENST00000394013 TRIM45Q9H8W5 580 aaPredicted RBP13.2□□□□□ -0.3
RNF41-202ENST00000394013 CNOT2Q9NZN8 540 aaKnown RBP13.2□□□□□ -0.3
RNF41-202ENST00000394013 MRPS33Q9Y291 106 aaKnown RBP13.2□□□□□ -0.3
RNF41-202ENST00000394013 IGHV3-20A0A0C4DH32 117 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 PATE3B3GLJ2 98 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 DSCR3O14972 297 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 SLC22A1O15245 554 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 MRPS14O60783 128 aaKnown RBP13.19□□□□□ -0.3
RNF41-202ENST00000394013 COQ9O75208 318 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 GPX5O75715 221 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 GCGRP47871 477 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 TGM4P49221 684 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 GRM7Q14831 915 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 OCLNQ16625 522 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 ANKK1Q8NFD2 765 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 TMEM163Q8TC26 289 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 TMEM203Q969S6 136 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 NACC2Q96BF6 587 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 NECAB3Q96P71 396 aaPredicted RBP13.19□□□□□ -0.3
RNF41-202ENST00000394013 ELF4Q99607 663 aaPredicted RBP13.19□□□□□ -0.3
RNF41-202ENST00000394013 SYNDIG1Q9H7V2 258 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 WDR70Q9NW82 654 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 CLCA3PQ9Y6N3 262 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 GPR179Q6PRD1 2367 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 FITM1A5D6W6 292 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 SURF4O15260 269 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 NUDT21O43809 227 aaKnown RBP13.19□□□□□ -0.3
RNF41-202ENST00000394013 WISP1O95388 367 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 TIAF1O95411 115 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 GSTM3P21266 225 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 ZNHIT3Q15649 155 aaPredicted RBP13.19□□□□□ -0.3
RNF41-202ENST00000394013 ZCCHC12Q6PEW1 402 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 KIRREL2Q6UWL6 708 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 APOOLQ6UXV4 268 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 SLC36A4Q6YBV0 504 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 LHFPL3Q86UP9 236 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 LRRC17Q8N6Y2 441 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 SH3YL1Q96HL8 342 aaPredicted RBP13.19□□□□□ -0.3
RNF41-202ENST00000394013 NXF5Q9H1B4 397 aaKnown RBP13.19□□□□□ -0.3
RNF41-202ENST00000394013 PCED1AQ9H1Q7 454 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 OR52D1Q9H346 318 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 UBQLN3Q9H347 655 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 HINT3Q9NQE9 182 aaKnown RBP13.19□□□□□ -0.3
RNF41-202ENST00000394013 SIDT1Q9NXL6 827 aaKnown RBP13.19□□□□□ -0.3
RNF41-202ENST00000394013 IL20Q9NYY1 176 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 CTSFQ9UBX1 484 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 EPHA6Q9UF33 1036 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 TESQ9UGI8 421 aaKnown RBP13.19□□□□□ -0.3
RNF41-202ENST00000394013 FBXL4Q9UKA2 621 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 RPL36Q9Y3U8 105 aaKnown RBP13.19□□□□□ -0.3
RNF41-202ENST00000394013 TECTAO75443 2155 aa13.19□□□□□ -0.3
RNF41-202ENST00000394013 SMIM30A4D0T7 59 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 GLB1P16278 677 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 TBXA2RP21731 343 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 DRD5P21918 477 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 FUT7Q11130 342 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 CD226Q15762 336 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 MOGQ16653 247 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 PGGHGQ32M88 737 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 FAM69BQ5VUD6 431 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 LIPKQ5VXJ0 399 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 C16orf47Q6ZP98 133 aaPredicted RBP13.18□□□□□ -0.3
RNF41-202ENST00000394013 LANCL3Q6ZV70 420 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 ADCK1Q86TW2 530 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 IGFN1Q86VF2 1251 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 GHDCQ8N2G8 530 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 SLC38A9Q8NBW4 561 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 TRUB1Q8WWH5 349 aaKnown RBP13.18□□□□□ -0.3
RNF41-202ENST00000394013 FCGR1BQ92637 280 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 GAL3ST4Q96RP7 486 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 PLGRKTQ9HBL7 147 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 CBLCQ9ULV8 474 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 PCDHGA3Q9Y5H0 932 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 DUX1O43812 170 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 PRAMEF2O60811 474 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 CLUP10909 449 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 BMP4P12644 408 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 IFNA8P32881 189 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 CSTF2P33240 577 aaKnown RBP eCLIP13.18□□□□□ -0.3
RNF41-202ENST00000394013 TCTE1Q5JU00 501 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 WDR45BQ5MNZ6 344 aa13.18□□□□□ -0.3
RNF41-202ENST00000394013 CBLN3Q6UW01 205 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms