RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SHC2P98077 582 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 RGS1Q08116 209 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 DBPQ10586 325 aaPredicted RBP17.5■□□□□ 0.39
CBX1-202ENST00000393408 SGCGQ13326 291 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 BTBD16Q32M84 506 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 PLA1AQ53H76 456 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 LAMTOR1Q6IAA8 161 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 ADGRD2Q7Z7M1 963 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 ASPGQ86U10 573 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 OR4N5Q8IXE1 308 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 RNF113BQ8IZP6 322 aaKnown RBP17.5■□□□□ 0.39
CBX1-202ENST00000393408 OR10H4Q8NGA5 316 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 OR4E2Q8NGC2 313 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 NT5CQ8TCD5 201 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 TMEM239Q8WW34 195 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 THAP7Q9BT49 309 aaPredicted RBP17.5■□□□□ 0.39
CBX1-202ENST00000393408 ZNF350Q9GZX5 532 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 E9PI62 339 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 SMLR1H3BR10 107 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 BTN3A3O00478 584 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 AKR7A2O43488 359 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 REM1O75628 298 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 GKN3PP0CG01 181 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 IFI30P13284 250 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 BMP7P18075 431 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 RBMS1P29558 406 aaKnown RBP17.49■□□□□ 0.39
CBX1-202ENST00000393408 TALDO1P37837 337 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 RPS15AP62244 130 aaKnown RBP17.49■□□□□ 0.39
CBX1-202ENST00000393408 GPLD1P80108 840 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 CCDC85BQ15834 202 aaPredicted RBP17.49■□□□□ 0.39
CBX1-202ENST00000393408 FAM27D1Q5T7N8 215 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 PSRC1Q6PGN9 363 aaPredicted RBP17.49■□□□□ 0.39
CBX1-202ENST00000393408 ARL9Q6T311 187 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 OAFQ86UD1 273 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 AMIGO1Q86WK6 493 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 SAMD14Q8IZD0 417 aaPredicted RBP17.49■□□□□ 0.39
CBX1-202ENST00000393408 SLC37A3Q8NCC5 494 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 PTP4A1Q93096 173 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 RFT1Q96AA3 541 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 INPP5EQ9NRR6 644 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 CLDND1Q9NY35 253 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 RASD1Q9Y272 281 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 C5orf42Q9H799 3197 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 LINC01553A4QN01 128 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 PLPP2O43688 288 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 HK1P19367 917 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 HTR2BP41595 481 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 SOX9P48436 509 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 RAB25P57735 213 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 OR10A3P58181 314 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 RPS21P63220 83 aaKnown RBP17.49■□□□□ 0.39
CBX1-202ENST00000393408 SIM1P81133 766 aaPredicted RBP17.49■□□□□ 0.39
CBX1-202ENST00000393408 OR1Q1Q15612 314 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 KLHL12Q53G59 568 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 THSD4Q6ZMP0 1018 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 ASB18Q6ZVZ8 466 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 SAMD12Q8N8I0 201 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 PIGUQ9H490 435 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 FOLH1BQ9HBA9 442 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 CMC2Q9NRP2 79 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 OR6C2Q9NZP2 312 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 HEBP2Q9Y5Z4 205 aa17.49■□□□□ 0.39
CBX1-202ENST00000393408 A0A0G2JK05 382 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 OR2B3O76000 313 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 MT-ND5P03915 603 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 NPR2P20594 1047 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 FCARP24071 287 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 E2F1Q01094 437 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 CCDC58Q4VC31 144 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 MRPL2Q5T653 305 aaKnown RBP17.48■□□□□ 0.39
CBX1-202ENST00000393408 SFXN4Q6P4A7 337 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 ZNF619Q8N2I2 560 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 DTX3Q8N9I9 347 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 LCN9Q8WX39 176 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 KLF15Q9UIH9 416 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 ZMIZ1Q9ULJ6 1067 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 COLEC10Q9Y6Z7 277 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 NOTOA8MTQ0 251 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 DNAJB6O75190 326 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 DBIP07108 87 aaKnown RBP17.48■□□□□ 0.39
CBX1-202ENST00000393408 PITPNBP48739 271 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 HTRA3P83110 453 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 FOXK2Q01167 660 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 RUNX3Q13761 415 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 RUNX2Q13950 521 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 TRAM1Q15629 374 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 TRMT12Q53H54 448 aaKnown RBP17.48■□□□□ 0.39
CBX1-202ENST00000393408 GARNL3Q5VVW2 1013 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 BICRALQ6AI39 1079 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 C17orf50Q8WW18 174 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 TEAD3Q99594 435 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 NDC1Q9BTX1 674 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 APOOQ9BUR5 198 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 KCNE5Q9UJ90 142 aa17.48■□□□□ 0.39
CBX1-202ENST00000393408 A0A1W2PQU0 124 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 FAM86C2PA6NEL3 165 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 SLC22A31A6NKX4 558 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 PRR23D1E9PI22 279 aaPredicted RBP17.47■□□□□ 0.39
CBX1-202ENST00000393408 RCBTB2O95199 551 aa17.47■□□□□ 0.39
CBX1-202ENST00000393408 PRR23D2P0DMB1 279 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms