RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 HMX3A6NHT5 357 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 CYR61O00622 381 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 TFECO14948 347 aaPredicted RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 PLA2G10O15496 165 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 RNF13O43567 381 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 NCR1O76036 304 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 RCBTB2O95199 551 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 IFI6P09912 130 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 PVRP15151 417 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 TBXA2RP21731 343 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 CFL1P23528 166 aaKnown RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 APEX1P27695 318 aaKnown RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 DDOSTP39656 456 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 MAP3K8P41279 467 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 LSSP48449 732 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 RNF144AP50876 292 aaPredicted RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 POU6F2P78424 691 aaPredicted RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 SHC2P98077 582 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 IFITM2Q01629 132 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 MGAT2Q10469 447 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 INSL4Q14641 139 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 LCN1P1Q5VSP4 162 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 GARNL3Q5VVW2 1013 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 RPL13AP3Q6NVV1 102 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 MZT2AQ6P582 158 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 KIAA1324Q6UXG2 1013 aaKnown RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 B3GLCTQ6Y288 498 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 TMEM91Q6ZNR0 172 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 RNF44Q7L0R7 432 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 LNX2Q8N448 690 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 ZNF655Q8N720 491 aaPredicted RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 Q8N9G6 341 aaPredicted RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 OR5T3Q8NGG3 340 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 BAHD1Q8TBE0 780 aaPredicted RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 ZFPM2Q8WW38 1151 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 PMM1Q92871 262 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 NACC2Q96BF6 587 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 MRGPRX1Q96LB2 322 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 ALG8Q9BVK2 526 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 ENKD1Q9H0I2 346 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 PPP1R3EQ9H7J1 279 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 ISG20L2Q9H9L3 353 aaKnown RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 NDRG2Q9UN36 371 aaKnown RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 TMEM5Q9Y2B1 443 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 ENTPD2Q9Y5L3 495 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 N6AMT1Q9Y5N5 214 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 C2orf92A0A1B0GVN3 265 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 C2orf74A8MZ97 194 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 B4DXG7 233 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 GTPBP1O00178 669 aaKnown RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 RGS9O75916 674 aaPredicted RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 HLA-DQB1P01920 261 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 PTBP1P26599 531 aaKnown RBP eCLIP11.41□□□□□ -0.58
RFC5-201ENST00000392542 MADCAM1Q13477 382 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 EXOSC7Q15024 291 aaKnown RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 SF3B4Q15427 424 aaKnown RBP eCLIP11.41□□□□□ -0.583e-7■■■■□ 22.6
RFC5-201ENST00000392542 AMZ1Q400G9 498 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 PRPF38BQ5VTL8 546 aaKnown RBP11.41□□□□□ -0.58
RFC5-201ENST00000392542 FIGNL1Q6PIW4 674 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 PRR23CQ6ZRP0 262 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 TMPRSS11FQ6ZWK6 438 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 CA13Q8N1Q1 262 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 TMEM99Q8N816 258 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 ST6GAL2Q96JF0 529 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 OR2B2Q9GZK3 357 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 RNF32Q9H0A6 362 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 NKX2-4Q9H2Z4 354 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 BABAM2Q9NXR7 383 aa11.41□□□□□ -0.58
RFC5-201ENST00000392542 GXYLT2A0PJZ3 443 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 ZC3H12DA2A288 527 aaKnown RBP11.4□□□□□ -0.58
RFC5-201ENST00000392542 FAM86C2PA6NEL3 165 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 BRINP1O60477 761 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 GALR3O60755 368 aaPredicted RBP11.4□□□□□ -0.58
RFC5-201ENST00000392542 CT62P0C5K7 136 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 SLC2A2P11168 524 aaPredicted RBP11.4□□□□□ -0.58
RFC5-201ENST00000392542 EVX1P49640 407 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 YPEL5P62699 121 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 ILF3Q12906 894 aaKnown RBP eCLIP11.4□□□□□ -0.58
RFC5-201ENST00000392542 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.4□□□□□ -0.58
RFC5-201ENST00000392542 TRIQKQ629K1 86 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 SMARCD3Q6STE5 483 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 CDK20Q8IZL9 346 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 PATE1Q8WXA2 126 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 KISS1RQ969F8 398 aaPredicted RBP11.4□□□□□ -0.58
RFC5-201ENST00000392542 TP63Q9H3D4 680 aaPredicted RBP11.4□□□□□ -0.58
RFC5-201ENST00000392542 SYNDIG1Q9H7V2 258 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 CMC2Q9NRP2 79 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 C14orf105Q9NVL8 296 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 MED31Q9Y3C7 131 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 A0A0J9YY10 115 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 FAM221BA6H8Z2 402 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 IDH3BO43837 385 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 BMP8BP34820 402 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 GABRA3P34903 492 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 KIR2DL3P43628 341 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 CTBP2P56545 445 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 FOXK2Q01167 660 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 PLAURQ03405 335 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 RIN1Q13671 783 aa11.4□□□□□ -0.58
RFC5-201ENST00000392542 SHHQ15465 462 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms