RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SYNPRQ8TBG9 265 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 SMPDL3BQ92485 455 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 C1QTNF2Q9BXJ5 285 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 PLCXD1Q9NUJ7 323 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 POM121CA8CG34 1229 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 TEKQ02763 1124 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 CATSPEREQ5SY80 951 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 CLVS2Q5SYC1 327 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 PXDC1Q5TGL8 231 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 MLIPQ5VWP3 458 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 FAM122BQ7Z309 247 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 OR4C15Q8NGM1 316 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 ZBTB8AQ96BR9 441 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 WBP1LQ9NX94 342 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 OIP5O43482 229 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 IL1RNP18510 177 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 HENMT1Q5T8I9 393 aaKnown RBP18.52■□□□□ 0.56
SHANK1-203ENST00000391813 PODNL1Q6PEZ8 512 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 APOOLQ6UXV4 268 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 ANGPTL6Q8NI99 470 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 FOXJ1Q92949 421 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 SLCO4A1Q96BD0 722 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 EGLN2Q96KS0 407 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF701Q9NV72 531 aaPredicted RBP18.52■□□□□ 0.56
SHANK1-203ENST00000391813 CYP8B1Q9UNU6 501 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 RDH16O75452 317 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 FLI1Q01543 452 aaPredicted RBP18.52■□□□□ 0.56
SHANK1-203ENST00000391813 DYRK1AQ13627 763 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 PTPRRQ15256 657 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 PGGHGQ32M88 737 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 TP53I3Q53FA7 332 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 SLC35F2Q8IXU6 374 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 AMBRA1Q9C0C7 1298 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 SCML1Q9UN30 329 aa18.52■□□□□ 0.56
SHANK1-203ENST00000391813 KIAA0355O15063 1070 aa18.52■□□□□ 0.55
SHANK1-203ENST00000391813 DRD1P21728 446 aa18.52■□□□□ 0.55
SHANK1-203ENST00000391813 PKDCCQ504Y2 493 aa18.52■□□□□ 0.55
SHANK1-203ENST00000391813 ALG10BQ5I7T1 473 aa18.52■□□□□ 0.55
SHANK1-203ENST00000391813 AVPI1Q5T686 147 aa18.52■□□□□ 0.55
SHANK1-203ENST00000391813 SLC6A19Q695T7 634 aa18.52■□□□□ 0.55
SHANK1-203ENST00000391813 LRFN4Q6PJG9 635 aa18.52■□□□□ 0.55
SHANK1-203ENST00000391813 SH2D5Q6ZV89 423 aa18.52■□□□□ 0.55
SHANK1-203ENST00000391813 SLC29A4Q7RTT9 530 aa18.52■□□□□ 0.55
SHANK1-203ENST00000391813 OSGIN1Q9UJX0 560 aa18.52■□□□□ 0.55
SHANK1-203ENST00000391813 TRDV1A0A1B0GX56 115 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 CDHR4A6H8M9 788 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 ZNF217O75362 1048 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 RAD51DO75771 328 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 THEGLP0DJG4 465 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 GZMKP49863 264 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 RACK1P63244 317 aaKnown RBP18.51■□□□□ 0.55
SHANK1-203ENST00000391813 HSD11B2P80365 405 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 ZNF674Q2M3X9 581 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 GAREM2Q75VX8 874 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 OR5H2Q8NGV7 314 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 AP1S3Q96PC3 154 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 N4BP2Q86UW6 1770 aaPredicted RBP18.51■□□□□ 0.55
SHANK1-203ENST00000391813 MN1Q10571 1320 aaPredicted RBP18.51■□□□□ 0.55
SHANK1-203ENST00000391813 SSX4O60224 188 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 ALDH3B1P43353 468 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 RNF144AP50876 292 aaPredicted RBP18.51■□□□□ 0.55
SHANK1-203ENST00000391813 TAS2R19P59542 299 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 DUSP6Q16828 381 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 GGTA1PQ4G0N0 100 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 FIBINQ8TAL6 211 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 FOXRED1Q96CU9 486 aaPredicted RBP18.51■□□□□ 0.55
SHANK1-203ENST00000391813 SYT3Q9BQG1 590 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 IL20RAQ9UHF4 553 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 OR6C65A6NJZ3 312 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 MAP4K2Q12851 820 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 SELENBP1Q13228 472 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 TSSK4Q6SA08 328 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 MEPCEQ7L2J0 689 aaKnown RBP18.51■□□□□ 0.55
SHANK1-203ENST00000391813 PAQR8Q8TEZ7 354 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 SCARB1Q8WTV0 552 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 MYLIPQ8WY64 445 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 NOX1Q9Y5S8 564 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 TOGARAM1Q9Y4F4 1720 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 GGT3PA6NGU5 568 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 GPR39O43194 453 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 SLC1A3P43003 542 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 LRIF1Q5T3J3 769 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 OR4E2Q8NGC2 313 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 NCDNQ9UBB6 729 aa18.51■□□□□ 0.55
SHANK1-203ENST00000391813 CPED1A4D0V7 1026 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 A6NIN4 97 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 GPR89AB7ZAQ6 455 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 GPR89BP0CG08 455 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 HMGN3Q15651 99 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 PUS10Q3MIT2 529 aaKnown RBP18.5■□□□□ 0.55
SHANK1-203ENST00000391813 SLC18B1Q6NT16 456 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 ASPGQ86U10 573 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 MCEMP1Q8IX19 187 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 SLC25A44Q96H78 314 aaPredicted RBP18.5■□□□□ 0.55
SHANK1-203ENST00000391813 PNO1Q9NRX1 252 aaKnown RBP18.5■□□□□ 0.55
SHANK1-203ENST00000391813 GFOD1Q9NXC2 390 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 SRPX2O60687 465 aaPredicted RBP18.5■□□□□ 0.55
SHANK1-203ENST00000391813 PIM1P11309 404 aaPredicted RBP18.5■□□□□ 0.55
SHANK1-203ENST00000391813 GNRHRP30968 328 aa18.5■□□□□ 0.55
SHANK1-203ENST00000391813 GDNFP39905 211 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms