RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 TEFMQ96QE5 360 aaKnown RBP3.21□□□□□ -1.9
TRAV39-201ENST00000390466 FERD3LQ96RJ6 166 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 C12orf57Q99622 126 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 SLC38A3Q99624 504 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 TREX2Q9BQ50 279 aaPredicted RBP3.21□□□□□ -1.9
TRAV39-201ENST00000390466 YIPF4Q9BSR8 244 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 SPON2Q9BUD6 331 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 HCAR1Q9BXC0 346 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 KLF16Q9BXK1 252 aaPredicted RBP3.21□□□□□ -1.9
TRAV39-201ENST00000390466 PBX4Q9BYU1 374 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 SLC6A16Q9GZN6 736 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 BTBD1Q9H0C5 482 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 HDHD2Q9H0R4 259 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 ATG10Q9H0Y0 220 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 SLC6A15Q9H2J7 730 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 CLEC4MQ9H2X3 399 aaPredicted RBP3.21□□□□□ -1.9
TRAV39-201ENST00000390466 RNF122Q9H9V4 155 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 ZFYVE1Q9HBF4 777 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 HRASLSQ9HDD0 168 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 SLC6A20Q9NP91 592 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 ACKR4Q9NPB9 350 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 FANCFQ9NPI8 374 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 HPF1Q9NWY4 346 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 MARCH5Q9NX47 278 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 BABAM2Q9NXR7 383 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 TAS2R5Q9NYW4 299 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 FAM8A1Q9UBU6 413 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 CTSFQ9UBX1 484 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 SEC14L3Q9UDX4 400 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 PRKAG2Q9UGJ0 569 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 CRLS1Q9UJA2 301 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF223Q9UK11 482 aaPredicted RBP3.21□□□□□ -1.9
TRAV39-201ENST00000390466 ICAM5Q9UMF0 924 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 PPIEQ9UNP9 301 aaKnown RBP3.21□□□□□ -1.9
TRAV39-201ENST00000390466 LHX6Q9UPM6 363 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 CLCA2Q9UQC9 943 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 CAMK2AQ9UQM7 478 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 GPR55Q9Y2T6 319 aaPredicted RBP3.21□□□□□ -1.9
TRAV39-201ENST00000390466 CARHSP1Q9Y2V2 147 aaKnown RBP3.21□□□□□ -1.9
TRAV39-201ENST00000390466 FCF1Q9Y324 198 aaKnown RBP3.21□□□□□ -1.9
TRAV39-201ENST00000390466 PLEKHM1Q9Y4G2 1056 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 MAP4K5Q9Y4K4 846 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 PCDHGA5Q9Y5G8 931 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 NPFFR2Q9Y5X5 522 aa3.21□□□□□ -1.9
TRAV39-201ENST00000390466 A0A1B0GTI1 187 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TMEM82A0PJX8 343 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 MEX3AA1L020 520 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TSPAN11A1L157 253 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 RNF222A6NCQ9 220 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ANTXRLA6NF34 631 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 OR2W5A6NFC9 320 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 MGAT4DA6NG13 374 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PCP4L1A6NKN8 68 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SLC38A8A6NNN8 435 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PRSS44E7EML9 344 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 LRRN3E7EW58 273 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 H3BN98 237 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TEX46H3BTG2 121 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 L7N2F9 121 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PLPP1O14494 284 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 BHLHE40O14503 412 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ARPC1BO15143 372 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 FGF16O43320 207 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 COCHO43405 550 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 CHST10O43529 356 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 LZTS3O60299 673 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PIP5K1CO60331 668 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SH3BGRLO75368 114 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 CDC123O75794 336 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TOXO94900 526 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 NDUFB6O95139 128 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 OR5F1O95221 314 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SIX6O95475 246 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 CXCL14O95715 111 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SLC16A8O95907 504 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 EGFP01133 1207 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 CD8AP01732 235 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 CD1AP06126 327 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 HEXAP06865 529 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 GP1BAP07359 652 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 MELTFP08582 738 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 UCHL1P09936 223 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 ERGP11308 486 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 EPXP11678 715 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 FOLR2P14207 255 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 SNRPBP14678 240 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 NPPBP16860 134 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 BTF3P20290 206 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PSMB1P20618 241 aaKnown RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 NT5EP21589 574 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 DRD5P21918 477 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 FPR3P25089 353 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 PAX6P26367 422 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 NOS3P29474 1203 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 CD52P31358 61 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 S100A11P31949 105 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 GKP32189 559 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 VIPR1P32241 457 aa3.2□□□□□ -1.9
TRAV39-201ENST00000390466 TRHRP34981 398 aaPredicted RBP3.2□□□□□ -1.9
TRAV39-201ENST00000390466 RPL3P39023 403 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms