RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 PIP5KL1Q5T9C9 394 aa13.97□□□□□ -0.17
CTNS-202ENST00000381870 GDF6Q6KF10 455 aaPredicted RBP13.97□□□□□ -0.17
CTNS-202ENST00000381870 DNAJB7Q7Z6W7 309 aaPredicted RBP13.97□□□□□ -0.17
CTNS-202ENST00000381870 OR5M1Q8NGP8 315 aa13.97□□□□□ -0.17
CTNS-202ENST00000381870 SMAP2Q8WU79 429 aaPredicted RBP13.97□□□□□ -0.17
CTNS-202ENST00000381870 ASZ1Q8WWH4 475 aa13.97□□□□□ -0.17
CTNS-202ENST00000381870 NARS2Q96I59 477 aaKnown RBP13.97□□□□□ -0.17
CTNS-202ENST00000381870 QRSL1Q9H0R6 528 aaKnown RBP13.97□□□□□ -0.17
CTNS-202ENST00000381870 TRIM36Q9NQ86 728 aa13.97□□□□□ -0.17
CTNS-202ENST00000381870 SIRT3Q9NTG7 399 aaPredicted RBP13.97□□□□□ -0.17
CTNS-202ENST00000381870 MED11Q9P086 117 aa13.97□□□□□ -0.17
CTNS-202ENST00000381870 NFKBIL1Q9UBC1 381 aaPredicted RBP13.97□□□□□ -0.17
CTNS-202ENST00000381870 CREBL2O60519 120 aaPredicted RBP13.96□□□□□ -0.17
CTNS-202ENST00000381870 NR2F1P10589 423 aa13.96□□□□□ -0.17
CTNS-202ENST00000381870 GPR4P46093 362 aa13.96□□□□□ -0.17
CTNS-202ENST00000381870 ACSM3Q53FZ2 586 aa13.96□□□□□ -0.17
CTNS-202ENST00000381870 FAM26DQ5JW98 314 aa13.96□□□□□ -0.17
CTNS-202ENST00000381870 FAM74A1Q5RGS3 127 aa13.96□□□□□ -0.17
CTNS-202ENST00000381870 PLBD1Q6P4A8 553 aa13.96□□□□□ -0.17
CTNS-202ENST00000381870 PXKQ7Z7A4 578 aa13.96□□□□□ -0.17
CTNS-202ENST00000381870 FBXO22Q8NEZ5 403 aa13.96□□□□□ -0.17
CTNS-202ENST00000381870 OR52I2Q8NH67 350 aa13.96□□□□□ -0.17
CTNS-202ENST00000381870 THEM6Q8WUY1 208 aa13.96□□□□□ -0.17
CTNS-202ENST00000381870 C19orf43Q9BQ61 176 aa13.96□□□□□ -0.17
CTNS-202ENST00000381870 ELAC1Q9H777 363 aaKnown RBP13.96□□□□□ -0.17
CTNS-202ENST00000381870 KLK11Q9UBX7 282 aa13.96□□□□□ -0.17
CTNS-202ENST00000381870 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.96□□□□□ -0.18
CTNS-202ENST00000381870 FOXE1O00358 373 aaPredicted RBP13.96□□□□□ -0.18
CTNS-202ENST00000381870 NPC1O15118 1278 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 OMPP47874 163 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 FNTBP49356 437 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 H2BFSP57053 126 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 TAS2R41P59536 307 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 MAT1AQ00266 395 aaKnown RBP13.96□□□□□ -0.18
CTNS-202ENST00000381870 LGALS3BPQ08380 585 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 PGGHGQ32M88 737 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 LINC00303Q3SY05 128 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 C18orf63Q68DL7 685 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 ZNF626Q68DY1 528 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 ZC3H14Q6PJT7 736 aaKnown RBP13.96□□□□□ -0.18
CTNS-202ENST00000381870 TPRG1Q6ZUI0 275 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 HTR3DQ70Z44 454 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 OR6V1Q8N148 313 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 OR10H4Q8NGA5 316 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 OR4D10Q8NGI6 311 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 OR5P2Q8WZ92 322 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 GINS4Q9BRT9 223 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 TRPC4Q9UBN4 977 aa13.96□□□□□ -0.18
CTNS-202ENST00000381870 TRAV20A0A0B4J274 112 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 DAPL1A0PJW8 107 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 CPSF4LA6NMK7 179 aaKnown RBP13.95□□□□□ -0.18
CTNS-202ENST00000381870 RTCAO00442 366 aaKnown RBP13.95□□□□□ -0.18
CTNS-202ENST00000381870 SLCO2B1O94956 709 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 EPXP11678 715 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 TBPL1P62380 186 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 ELP2Q6IA86 826 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 OR7E24Q6IFN5 339 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 FAM83HQ6ZRV2 1179 aaPredicted RBP13.95□□□□□ -0.18
CTNS-202ENST00000381870 CXXC5Q7LFL8 322 aaKnown RBP13.95□□□□□ -0.18
CTNS-202ENST00000381870 BOLLQ8N9W6 283 aaKnown RBP13.95□□□□□ -0.18
CTNS-202ENST00000381870 OR10K1Q8NGX5 313 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 BBS10Q8TAM1 723 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 PNPLA2Q96AD5 504 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 JAM3Q9BX67 310 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 SEMA4GQ9NTN9 838 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 TAS2R3Q9NYW6 316 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 OPN4Q9UHM6 478 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 HMSDA8MTL9 139 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 GPR31O00270 319 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 CTDSPLO15194 276 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 REM1O75628 298 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 ATG12O94817 140 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 TYRP14679 529 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 NPPBP16860 134 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 PAICSP22234 425 aaKnown RBP13.95□□□□□ -0.18
CTNS-202ENST00000381870 CTSCP53634 463 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 UBE2MP61081 183 aaKnown RBP13.95□□□□□ -0.18
CTNS-202ENST00000381870 HEPHL1Q6MZM0 1159 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 CMTM4Q8IZR5 234 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 LGALS14Q8TCE9 139 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 SMPDL3AQ92484 453 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 SCAMP4Q969E2 229 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 ALG14Q96F25 216 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 TAS2R5Q9NYW4 299 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 P2RX2Q9UBL9 471 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 NPFFR2Q9Y5X5 522 aa13.95□□□□□ -0.18
CTNS-202ENST00000381870 MYADML2A6NDP7 307 aa13.94□□□□□ -0.18
CTNS-202ENST00000381870 PLPP2O43688 288 aa13.94□□□□□ -0.18
CTNS-202ENST00000381870 ZNF821O75541 412 aaPredicted RBP13.94□□□□□ -0.18
CTNS-202ENST00000381870 SC5DO75845 299 aa13.94□□□□□ -0.18
CTNS-202ENST00000381870 SERPIND1P05546 499 aa13.94□□□□□ -0.18
CTNS-202ENST00000381870 SAGP10523 405 aaPredicted RBP13.94□□□□□ -0.18
CTNS-202ENST00000381870 PTHLHP12272 177 aa13.94□□□□□ -0.18
CTNS-202ENST00000381870 ZNF35P13682 527 aa13.94□□□□□ -0.18
CTNS-202ENST00000381870 PTGER1P34995 402 aa13.94□□□□□ -0.18
CTNS-202ENST00000381870 GDI2P50395 445 aaKnown RBP13.94□□□□□ -0.18
CTNS-202ENST00000381870 ZNF528Q3MIS6 628 aa13.94□□□□□ -0.18
CTNS-202ENST00000381870 SYTL3Q4VX76 610 aa13.94□□□□□ -0.18
CTNS-202ENST00000381870 ZDHHC20Q5W0Z9 365 aa13.94□□□□□ -0.18
CTNS-202ENST00000381870 LRRN1Q6UXK5 716 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms