RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 ALDH3A1P30838 453 aa15.06■□□□□ 0
SMN2-201ENST00000380741 HPCAL1P37235 193 aa15.06■□□□□ 0
SMN2-201ENST00000380741 ZNF117Q03924 483 aa15.06■□□□□ 0
SMN2-201ENST00000380741 ARL13AQ5H913 290 aaPredicted RBP15.06■□□□□ 0
SMN2-201ENST00000380741 LRIG3Q6UXM1 1119 aa15.06■□□□□ 0
SMN2-201ENST00000380741 BEND4Q6ZU67 534 aa15.06■□□□□ 0
SMN2-201ENST00000380741 TRABD2AQ86V40 505 aa15.06■□□□□ 0
SMN2-201ENST00000380741 LILRA2Q8N149 483 aa15.06■□□□□ 0
SMN2-201ENST00000380741 OR7A2PQ8NGA2 310 aa15.06■□□□□ 0
SMN2-201ENST00000380741 APOPT1Q96IL0 206 aa15.06■□□□□ 0
SMN2-201ENST00000380741 KLHL15Q96M94 604 aa15.06■□□□□ 0
SMN2-201ENST00000380741 STACQ99469 402 aa15.06■□□□□ 0
SMN2-201ENST00000380741 MECRQ9BV79 373 aa15.06■□□□□ 0
SMN2-201ENST00000380741 ACTR6Q9GZN1 396 aa15.06■□□□□ 0
SMN2-201ENST00000380741 C12orf49Q9H741 205 aa15.06■□□□□ 0
SMN2-201ENST00000380741 TRAF6Q9Y4K3 522 aa15.06■□□□□ 0
SMN2-201ENST00000380741 SNX8Q9Y5X2 465 aa15.06■□□□□ 0
SMN2-201ENST00000380741 CSPG4Q6UVK1 2322 aa15.06■□□□□ 0
SMN2-201ENST00000380741 NPIPA5A0A0B4J1W7 369 aa15.05■□□□□ -0
SMN2-201ENST00000380741 TMEM114B3SHH9 223 aa15.05■□□□□ -0
SMN2-201ENST00000380741 NPIPA7E9PJI5 369 aa15.05■□□□□ -0
SMN2-201ENST00000380741 SMAD7O15105 426 aaKnown RBP15.05■□□□□ -0
SMN2-201ENST00000380741 OIP5O43482 229 aa15.05■□□□□ -0
SMN2-201ENST00000380741 NPHS1O60500 1241 aa15.05■□□□□ -0
SMN2-201ENST00000380741 TUBBP07437 444 aa15.05■□□□□ -0
SMN2-201ENST00000380741 NPIPA8P0DM63 369 aa15.05■□□□□ -0
SMN2-201ENST00000380741 LAMP1P11279 417 aa15.05■□□□□ -0
SMN2-201ENST00000380741 DDX5P17844 614 aaKnown RBP15.05■□□□□ -0
SMN2-201ENST00000380741 SFTPDP35247 375 aa15.05■□□□□ -0
SMN2-201ENST00000380741 PTH2RP49190 550 aa15.05■□□□□ -0
SMN2-201ENST00000380741 RNF144AP50876 292 aaPredicted RBP15.05■□□□□ -0
SMN2-201ENST00000380741 FOXF1Q12946 379 aa15.05■□□□□ -0
SMN2-201ENST00000380741 PTGR1Q14914 329 aa15.05■□□□□ -0
SMN2-201ENST00000380741 PDSS1Q5T2R2 415 aa15.05■□□□□ -0
SMN2-201ENST00000380741 CBLN3Q6UW01 205 aa15.05■□□□□ -0
SMN2-201ENST00000380741 ZNF704Q6ZNC4 412 aaPredicted RBP15.05■□□□□ -0
SMN2-201ENST00000380741 PLEKHM3Q6ZWE6 761 aa15.05■□□□□ -0
SMN2-201ENST00000380741 STK32CQ86UX6 486 aa15.05■□□□□ -0
SMN2-201ENST00000380741 PHOSPHO1Q8TCT1 267 aa15.05■□□□□ -0
SMN2-201ENST00000380741 AGR3Q8TD06 166 aa15.05■□□□□ -0
SMN2-201ENST00000380741 IGFBPL1Q8WX77 278 aa15.05■□□□□ -0
SMN2-201ENST00000380741 ROBO4Q8WZ75 1007 aa15.05■□□□□ -0
SMN2-201ENST00000380741 OSTF1Q92882 214 aa15.05■□□□□ -0
SMN2-201ENST00000380741 BDH2Q9BUT1 245 aa15.05■□□□□ -0
SMN2-201ENST00000380741 GSX2Q9BZM3 304 aa15.05■□□□□ -0
SMN2-201ENST00000380741 PIGUQ9H490 435 aa15.05■□□□□ -0
SMN2-201ENST00000380741 FANCFQ9NPI8 374 aa15.05■□□□□ -0
SMN2-201ENST00000380741 MKS1Q9NXB0 559 aa15.05■□□□□ -0
SMN2-201ENST00000380741 GIN1Q9NXP7 522 aa15.05■□□□□ -0
SMN2-201ENST00000380741 TLDC2A0PJX2 215 aa15.04■□□□□ -0
SMN2-201ENST00000380741 PEX11AO75192 247 aa15.04■□□□□ -0
SMN2-201ENST00000380741 PLAUP00749 431 aa15.04■□□□□ -0
SMN2-201ENST00000380741 NID1P14543 1247 aa15.04■□□□□ -0
SMN2-201ENST00000380741 ELK4P28324 431 aa15.04■□□□□ -0
SMN2-201ENST00000380741 MAPK1P28482 360 aa15.04■□□□□ -0
SMN2-201ENST00000380741 EIF1P41567 113 aaKnown RBP15.04■□□□□ -0
SMN2-201ENST00000380741 CARD18P57730 90 aa15.04■□□□□ -0
SMN2-201ENST00000380741 TP53BP2Q13625 1128 aa15.04■□□□□ -0
SMN2-201ENST00000380741 ZNF239Q16600 458 aaKnown RBP15.04■□□□□ -0
SMN2-201ENST00000380741 XKR7Q5GH72 579 aa15.04■□□□□ -0
SMN2-201ENST00000380741 CDC73Q6P1J9 531 aa15.04■□□□□ -0
SMN2-201ENST00000380741 MTERF4Q7Z6M4 381 aaKnown RBP15.04■□□□□ -0
SMN2-201ENST00000380741 WFDC8Q8IUA0 241 aa15.04■□□□□ -0
SMN2-201ENST00000380741 BANPQ8N9N5 519 aa15.04■□□□□ -0
SMN2-201ENST00000380741 OR2W6PQ8NHA6 318 aa15.04■□□□□ -0
SMN2-201ENST00000380741 PSMA8Q8TAA3 256 aa15.04■□□□□ -0
SMN2-201ENST00000380741 RNF128Q8TEB7 428 aa15.04■□□□□ -0
SMN2-201ENST00000380741 ABHD3Q8WU67 409 aa15.04■□□□□ -0
SMN2-201ENST00000380741 NUDT8Q8WV74 236 aa15.04■□□□□ -0
SMN2-201ENST00000380741 PLPPR2Q96GM1 343 aa15.04■□□□□ -0
SMN2-201ENST00000380741 PPP3R2Q96LZ3 170 aa15.04■□□□□ -0
SMN2-201ENST00000380741 C1orf50Q9BV19 199 aa15.04■□□□□ -0
SMN2-201ENST00000380741 SRXN1Q9BYN0 137 aa15.04■□□□□ -0
SMN2-201ENST00000380741 CXorf36Q9H7Y0 433 aa15.04■□□□□ -0
SMN2-201ENST00000380741 EML4Q9HC35 981 aaKnown RBP15.04■□□□□ -0
SMN2-201ENST00000380741 SLC17A7Q9P2U7 560 aa15.04■□□□□ -0
SMN2-201ENST00000380741 EFNA2O43921 213 aa15.03■□□□□ -0
SMN2-201ENST00000380741 NUDT14O95848 222 aa15.03■□□□□ -0
SMN2-201ENST00000380741 PSMB1P20618 241 aaKnown RBP15.03■□□□□ -0
SMN2-201ENST00000380741 ATP6V1C1P21283 382 aa15.03■□□□□ -0
SMN2-201ENST00000380741 ARRB2P32121 409 aa15.03■□□□□ -0
SMN2-201ENST00000380741 RPL3P39023 403 aaKnown RBP15.03■□□□□ -0
SMN2-201ENST00000380741 CCT3P49368 545 aaKnown RBP15.03■□□□□ -0
SMN2-201ENST00000380741 NR1H2P55055 460 aa15.03■□□□□ -0
SMN2-201ENST00000380741 ZNF844Q08AG5 666 aa15.03■□□□□ -0
SMN2-201ENST00000380741 KLHL26Q53HC5 615 aa15.03■□□□□ -0
SMN2-201ENST00000380741 DCST2Q5T1A1 773 aa15.03■□□□□ -0
SMN2-201ENST00000380741 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.03■□□□□ -0
SMN2-201ENST00000380741 GTF2IRD2BQ6EKJ0 949 aa15.03■□□□□ -0
SMN2-201ENST00000380741 ZCCHC23Q6ZST2 131 aa15.03■□□□□ -0
SMN2-201ENST00000380741 GTF2IRD2Q86UP8 949 aa15.03■□□□□ -0
SMN2-201ENST00000380741 HOMEZQ8IX15 550 aa15.03■□□□□ -0
SMN2-201ENST00000380741 ZNF527Q8NB42 609 aa15.03■□□□□ -0
SMN2-201ENST00000380741 OR56A1Q8NGH5 318 aa15.03■□□□□ -0
SMN2-201ENST00000380741 FBXO27Q8NI29 283 aa15.03■□□□□ -0
SMN2-201ENST00000380741 TMEM171Q8WVE6 324 aa15.03■□□□□ -0
SMN2-201ENST00000380741 OR5P2Q8WZ92 322 aa15.03■□□□□ -0
SMN2-201ENST00000380741 CPNE4Q96A23 557 aaPredicted RBP15.03■□□□□ -0
SMN2-201ENST00000380741 C3orf30Q96M34 536 aa15.03■□□□□ -0
SMN2-201ENST00000380741 ACTRT3Q9BYD9 372 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms