RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 OPA3Q9H6K4 179 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 ACSS1Q9NUB1 689 aaPredicted RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 NTMQ9P121 344 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 FLVCR2Q9UPI3 526 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 ZFP37Q9Y6Q3 630 aaPredicted RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 BRCA1P38398 1863 aaKnown RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 SLC22A31A6NKX4 558 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 FFAR1O14842 300 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 LATS1O95835 1130 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 RB1P06400 928 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 BMP7P18075 431 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 HOXD9P28356 352 aaPredicted RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 TSTA3Q13630 321 aaPredicted RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 ZNF234Q14588 700 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 TMEM69Q5SWH9 247 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 OLFML2AQ68BL7 652 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 H3F3CQ6NXT2 135 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 TMEM88Q6PEY1 159 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 BEST3Q8N1M1 668 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 GTPBP8Q8N3Z3 284 aaPredicted RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 C2CD4CQ8TF44 421 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 C16orf78Q8WTQ4 265 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 QRSL1Q9H0R6 528 aaKnown RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 ASF1BQ9NVP2 202 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 MRPL15Q9P015 296 aaKnown RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 MIOXQ9UGB7 285 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 OPN4Q9UHM6 478 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 COL11A1P12107 1806 aaPredicted RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 PRAMEF25A6NGN4 478 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 TNFRSF10BO14763 440 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 YY2O15391 372 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 RBBP9O75884 186 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 NDUFB6O95139 128 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 C1QCP02747 245 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 ASGR2P07307 311 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 FURINP09958 794 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 KHKP50053 298 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 TAS2R50P59544 299 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 UBE2IP63279 158 aaKnown RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 IRF5Q13568 498 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 EIF2S3LQ2VIR3 472 aaKnown RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 ARSIQ5FYB1 569 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 RNF219Q5W0B1 726 aaPredicted RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 BEND4Q6ZU67 534 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 TMPRSS9Q7Z410 1059 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 JAZF1Q86VZ6 243 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 OR5J2Q8NH18 312 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 SLC38A5Q8WUX1 472 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 NEURL3Q96EH8 262 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 CMSS1Q9BQ75 279 aaKnown RBP6.79□□□□□ -1.32
DDX58-202ENST00000379883 C11orf49Q9H6J7 331 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 SEMA4GQ9NTN9 838 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 PIPOXQ9P0Z9 390 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 ACAD8Q9UKU7 415 aa6.79□□□□□ -1.32
DDX58-202ENST00000379883 MYLKQ15746 1914 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 DNAJC25-GNG10A0A024R161 153 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 TTLL8A6PVC2 850 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 ANHXE9PGG2 379 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 CSF1P09603 554 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 SNRPBP14678 240 aaKnown RBP6.78□□□□□ -1.32
DDX58-202ENST00000379883 MVDP53602 400 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 SORDQ00796 357 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 POU4F2Q12837 409 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 ILF3Q12906 894 aaKnown RBP eCLIP6.78□□□□□ -1.32
DDX58-202ENST00000379883 UPP1Q16831 310 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 PGGHGQ32M88 737 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 RPS26P11Q5JNZ5 115 aaPredicted RBP6.78□□□□□ -1.32
DDX58-202ENST00000379883 TEX30Q5JUR7 227 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 LPCAT3Q6P1A2 487 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 SERPINA13PQ6UXR4 307 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 NUDT18Q6ZVK8 323 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 CDK20Q8IZL9 346 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 HS6ST3Q8IZP7 471 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 LILRB2Q8N423 598 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 OR11G2Q8NGC1 345 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 THEM6Q8WUY1 208 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 HSPA12BQ96MM6 686 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 ZDHHC5Q9C0B5 715 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 PPP4R1LQ9P1A2 415 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 TINAGQ9UJW2 476 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 PRG3Q9Y2Y8 225 aaPredicted RBP6.78□□□□□ -1.32
DDX58-202ENST00000379883 PLXNA1Q9UIW2 1896 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 TRBV5-4A0A0C4DH59 114 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 TO15178 435 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 FMO6PO60774 539 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 CRYBA1P05813 215 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 GP1BAP07359 652 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 RGRP47804 291 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 ARHGDIBP52566 201 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 RAB4BP61018 213 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 SNRPEP62304 92 aaKnown RBP6.78□□□□□ -1.32
DDX58-202ENST00000379883 EIF5AP63241 154 aaKnown RBP6.78□□□□□ -1.32
DDX58-202ENST00000379883 ZNF528Q3MIS6 628 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 PRAMEF18Q5VWM3 479 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 MOB3CQ70IA8 216 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 MEPCEQ7L2J0 689 aaKnown RBP6.78□□□□□ -1.32
DDX58-202ENST00000379883 SLC16A13Q7RTY0 426 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 C12orf40Q86WS4 652 aa6.78□□□□□ -1.32
DDX58-202ENST00000379883 RELL2Q8NC24 303 aaPredicted RBP6.78□□□□□ -1.32
DDX58-202ENST00000379883 OR2AK2Q8NG84 335 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms