RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 C6orf120Q7Z4R8 191 aa8.28□□□□□ -1.08
LIG3-202ENST00000378526 LNX1Q8TBB1 728 aaPredicted RBP8.28□□□□□ -1.08
LIG3-202ENST00000378526 RAET1EQ8TD07 263 aa8.28□□□□□ -1.08
LIG3-202ENST00000378526 ZCCHC14Q8WYQ9 949 aaKnown RBP8.28□□□□□ -1.08
LIG3-202ENST00000378526 RSG1Q9BU20 258 aa8.28□□□□□ -1.08
LIG3-202ENST00000378526 TDP1Q9NUW8 608 aa8.28□□□□□ -1.08
LIG3-202ENST00000378526 ELOVL2Q9NXB9 296 aa8.28□□□□□ -1.08
LIG3-202ENST00000378526 NFASCO94856 1347 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 TMEM218A2RU14 115 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 E5RGE8 158 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 CCSO14618 274 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 ADRA2BP18089 450 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 SHMT2P34897 504 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 ACTR1BP42025 376 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 PTGIRP43119 386 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 NDST2P52849 883 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 PPP1CBP62140 327 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 RPL7L1Q6DKI1 246 aaKnown RBP8.27□□□□□ -1.08
LIG3-202ENST00000378526 NRARPQ7Z6K4 114 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 DNAJC5GQ8N7S2 189 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 ANKLE1Q8NAG6 615 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 DNERQ8NFT8 737 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 RHEBL1Q8TAI7 183 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 CMBLQ96DG6 245 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 OR10C1Q96KK4 312 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 FTHL17Q9BXU8 183 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 SPNS1Q9H2V7 528 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 VCX2Q9H322 139 aa8.27□□□□□ -1.08
LIG3-202ENST00000378526 TBC1D3BA6NDS4 549 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 ZFP92A6NM28 416 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 LACTBL1A8MY62 500 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 CT45A10P0DMU9 189 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 ACKR3P25106 362 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 BSGP35613 385 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 ERVPABLB-1P60509 514 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 ACTR1AP61163 376 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 ZNF763Q0D2J5 394 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 KCNC3Q14003 757 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 TMEM244Q5VVB8 128 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 MBLAC2Q68D91 279 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 SBSNQ6UWP8 590 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 SFT2D1Q8WV19 159 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 GPR173Q9NS66 373 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.27□□□□□ -1.09
LIG3-202ENST00000378526 CNTNAP4Q9C0A0 1308 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 POM121BA6NF01 834 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 SLC9B1P1A6NJY1 282 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 LGALS8O00214 317 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 GPR39O43194 453 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 CNMDO75829 334 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 AREGP15514 252 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 PFKLP17858 780 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 RPL29P47914 159 aaKnown RBP8.27□□□□□ -1.09
LIG3-202ENST00000378526 RFX2P48378 723 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 PSMB2P49721 201 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 TAS2R40P59535 323 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 MRPS5P82675 430 aaKnown RBP8.27□□□□□ -1.09
LIG3-202ENST00000378526 APOFQ13790 326 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 Q6ZNX1 250 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 MAMDC2Q7Z304 686 aaPredicted RBP8.27□□□□□ -1.09
LIG3-202ENST00000378526 C20orf24Q9BUV8 137 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 OSER1Q9NX31 292 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 V9GY05 133 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 LOC102723532A0A0G2JNH3 316 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 PAGE1O75459 146 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 CD99P14209 185 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 MMP11P24347 488 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 GABRB3P28472 473 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 PLA2G15Q8NCC3 412 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 DTD1Q8TEA8 209 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 KIAA1191Q96A73 305 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 PHYHIPLQ96FC7 376 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 DCLRE1CQ96SD1 692 aaKnown RBP8.27□□□□□ -1.09
LIG3-202ENST00000378526 ST6GALNAC5Q9BVH7 336 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 NOSIPQ9Y314 301 aaKnown RBP8.27□□□□□ -1.09
LIG3-202ENST00000378526 TP53BP1Q12888 1972 aaPredicted RBP8.27□□□□□ -1.09
LIG3-202ENST00000378526 CHD3Q12873 2000 aaKnown RBP8.27□□□□□ -1.09
LIG3-202ENST00000378526 CASTOR2A6NHX0 329 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 GRM6O15303 877 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 OR13C7P0DN81 318 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 HSD17B1P14061 328 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 SRMP19623 302 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 ITGB8P26012 769 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 GLUD2P49448 558 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 YBEYP58557 167 aaPredicted RBP8.27□□□□□ -1.09
LIG3-202ENST00000378526 UFM1P61960 85 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 TMEM35AQ53FP2 167 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 LRFN4Q6PJG9 635 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 ACOT7LQ6ZUV0 252 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 OR10D4PQ8NGN7 298 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 PPP1R35Q8TAP8 253 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 CYP2W1Q8TAV3 490 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 LRRN4Q8WUT4 740 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 NANOS1Q8WY41 292 aaKnown RBP8.27□□□□□ -1.09
LIG3-202ENST00000378526 HERVK_113Q902F9 699 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 HAS1Q92839 578 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 RCCD1A6NED2 376 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 ZNF724A8MTY0 619 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 BMPR1BO00238 502 aa8.27□□□□□ -1.09
LIG3-202ENST00000378526 SDHBP21912 280 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms