RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 CLUP10909 449 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 HK1P19367 917 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 TALDO1P37837 337 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 SLC16A1P53985 500 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 EEF1A1P68104 462 aaKnown RBP12.29□□□□□ -0.44
ACTN1-202ENST00000376839 SLC25A35Q3KQZ1 300 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 TJAP1Q5JTD0 557 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 PRPF38BQ5VTL8 546 aaKnown RBP12.29□□□□□ -0.44
ACTN1-202ENST00000376839 VN1R4Q7Z5H5 301 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 OAFQ86UD1 273 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 C9orf62Q8N4C0 152 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 OR5H6Q8NGV6 325 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 PTP4A1Q93096 173 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 SMAD5Q99717 465 aaKnown RBP12.29□□□□□ -0.44
ACTN1-202ENST00000376839 SYNDIG1Q9H7V2 258 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 MTHFD2LQ9H903 347 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-202ENST00000376839 TRIM36Q9NQ86 728 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 NCKAP1Q9Y2A7 1128 aa12.29□□□□□ -0.44
ACTN1-202ENST00000376839 RNGTTO60942 597 aaKnown RBP12.28□□□□□ -0.44
ACTN1-202ENST00000376839 TSC22D2O75157 780 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 CEACAM5P06731 702 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 IFI30P13284 250 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 IL9P15248 144 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 TEAD1P28347 426 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 NOS3P29474 1203 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 GALEQ14376 348 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 RNASE12Q5GAN4 147 aaKnown RBP12.28□□□□□ -0.44
ACTN1-202ENST00000376839 ZNF425Q6IV72 752 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 CREB3L2Q70SY1 520 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 KRT74Q7RTS7 529 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 CEACAM19Q7Z692 300 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 OR13C2Q8NGS9 318 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 PHF21AQ96BD5 680 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 TRAF4Q9BUZ4 470 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-202ENST00000376839 RAB11FIP5Q9BXF6 653 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 OR51V1Q9H2C8 321 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 TMEM74BQ9NUR3 256 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 FBXO34Q9NWN3 711 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 FBXL4Q9UKA2 621 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 A0A1W2PP55 124 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 SYNDIG1LA6NDD5 238 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 SLC9B1P1A6NJY1 282 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 DUXAA6NLW8 204 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 ACVR1BP36896 505 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 RFX3P48380 749 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 PITPNBP48739 271 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 RPS7P62081 194 aaKnown RBP12.28□□□□□ -0.44
ACTN1-202ENST00000376839 BTG1P62324 171 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 SIM1P81133 766 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-202ENST00000376839 ID2Q02363 134 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 C19orf57Q0VDD7 668 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 ANKRD54Q6NXT1 300 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 MTSS1LQ765P7 747 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 LRRC25Q8N386 305 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-202ENST00000376839 SRFBP1Q8NEF9 429 aaKnown RBP12.28□□□□□ -0.44
ACTN1-202ENST00000376839 OR52L1Q8NGH7 329 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 OR13C5Q8NGS8 318 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 TRMT10AQ8TBZ6 339 aaKnown RBP12.28□□□□□ -0.44
ACTN1-202ENST00000376839 AHCYL2Q96HN2 611 aaKnown RBP12.28□□□□□ -0.44
ACTN1-202ENST00000376839 HS6ST2Q96MM7 605 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 CD180Q99467 661 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 PHPT1Q9NRX4 125 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-202ENST00000376839 NUDT15Q9NV35 164 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 ZNF624Q9P2J8 865 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-202ENST00000376839 PHF11Q9UIL8 331 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 CLEC4AQ9UMR7 237 aa12.28□□□□□ -0.44
ACTN1-202ENST00000376839 BTN3A3O00478 584 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 NPR2P20594 1047 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 AHCYP23526 432 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 RBMS1P29558 406 aaKnown RBP12.27□□□□□ -0.44
ACTN1-202ENST00000376839 OR3A3P47888 321 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 RPE65Q16518 533 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 NTRK2Q16620 822 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 CEP78Q5JTW2 689 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 TIGD4Q8IY51 512 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 TMEM239Q8WW34 195 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 C4orf36Q96KX1 117 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 SDF2Q99470 211 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 TIMM29Q9BSF4 260 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 SARGQ9BW04 601 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 TTTY10Q9BZA0 68 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 KLHL1Q9NR64 748 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 CLDND1Q9NY35 253 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 THAP10Q9P2Z0 257 aaPredicted RBP12.27□□□□□ -0.44
ACTN1-202ENST00000376839 CACNG2Q9Y698 323 aa12.27□□□□□ -0.44
ACTN1-202ENST00000376839 A0A0B4J203 849 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 TRAPPC13A5PLN9 417 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 PEX12O00623 359 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 LYPD3O95274 346 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 F8A1P23610 371 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 CMPK1P30085 196 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 ACSL1P33121 698 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 OR12D2P58182 307 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 OR1Q1Q15612 314 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 CST6Q15828 149 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 ARHGAP11BQ3KRB8 267 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 TRMT12Q53H54 448 aaKnown RBP12.27□□□□□ -0.45
ACTN1-202ENST00000376839 ZNF767PQ75MW2 155 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 RTL10Q7L3V2 364 aa12.27□□□□□ -0.45
ACTN1-202ENST00000376839 GHDCQ8N2G8 530 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms