RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ARSBP15848 533 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 F8A1P23610 371 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 TALDO1P37837 337 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 SLC16A1P53985 500 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 RRAS2P62070 204 aaPredicted RBP13.52□□□□□ -0.25
MSH5-201ENST00000375703 RPS7P62081 194 aaKnown RBP13.52□□□□□ -0.25
MSH5-201ENST00000375703 RUNX2Q13950 521 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 SUZ12Q15022 739 aaKnown RBP13.52□□□□□ -0.25
MSH5-201ENST00000375703 CDK20Q8IZL9 346 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 DTX3Q8N9I9 347 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 PTP4A1Q93096 173 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 TRIM63Q969Q1 353 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 AHCYL2Q96HN2 611 aaKnown RBP13.52□□□□□ -0.25
MSH5-201ENST00000375703 PPIL3Q9H2H8 161 aaKnown RBP13.52□□□□□ -0.25
MSH5-201ENST00000375703 PIGUQ9H490 435 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 CYSLTR2Q9NS75 346 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 TBC1D29Q9UFV1 150 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 TRBV23OR9-2A0A075B6M9 112 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 FAM86C2PA6NEL3 165 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 SLC31A1O15431 190 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 C1QBP02746 253 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 APODP05090 189 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 LAMP2P13473 410 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 HTR2AP28223 471 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 RAB25P57735 213 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 ARL9Q6T311 187 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 NUDT18Q6ZVK8 323 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 ASB18Q6ZVZ8 466 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 LRRC28Q86X40 367 aaPredicted RBP13.51□□□□□ -0.25
MSH5-201ENST00000375703 ZNF619Q8N2I2 560 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 LNX2Q8N448 690 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 SLC37A3Q8NCC5 494 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 NT5CQ8TCD5 201 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 SERINC2Q96SA4 455 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 TEAD3Q99594 435 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 THAP7Q9BT49 309 aaPredicted RBP13.51□□□□□ -0.25
MSH5-201ENST00000375703 OR51V1Q9H2C8 321 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 NIPAL2Q9H841 368 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 FGF22Q9HCT0 170 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 ADAP2Q9NPF8 381 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 ENAMQ9NRM1 1142 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 MCUBQ9NWR8 336 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 OBP2AQ9NY56 170 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 SCN3AQ9NY46 2000 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 PRR23D1E9PI22 279 aaPredicted RBP13.51□□□□□ -0.25
MSH5-201ENST00000375703 C5orf67F2Z3F1 127 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 STX11O75558 287 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 RCBTB2O95199 551 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 EML2O95834 649 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 DBIP07108 87 aaKnown RBP13.51□□□□□ -0.25
MSH5-201ENST00000375703 PRR23D2P0DMB1 279 aaPredicted RBP13.51□□□□□ -0.25
MSH5-201ENST00000375703 MYOGP15173 224 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 TBXA2RP21731 343 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 FCARP24071 287 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 FOXK2Q01167 660 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 GALK2Q01415 458 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 ID2Q02363 134 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 MRPL2Q5T653 305 aaKnown RBP13.51□□□□□ -0.25
MSH5-201ENST00000375703 IL20RBQ6UXL0 311 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 USP53Q70EK8 1073 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 PLCZ1Q86YW0 608 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 IFT27Q9BW83 186 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 SRMSQ9H3Y6 488 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 CLDND1Q9NY35 253 aa13.51□□□□□ -0.25
MSH5-201ENST00000375703 MDC1Q14676 2089 aaKnown RBP13.51□□□□□ -0.25
MSH5-201ENST00000375703 TBC1D3DA0A087WVF3 549 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 TBC1D3IA0A087WXS9 549 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 TBC1D3EA0A087X179 549 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 TBC1D3LB9A6J9 549 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 B3GALT2O43825 422 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 MT-ND5P03915 603 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 TBC1D3HP0C7X1 549 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 CPMP14384 443 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 PRKCAP17252 672 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 GPR176Q14439 515 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 FAM27D1Q5T7N8 215 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 ZNF776Q68DI1 518 aaPredicted RBP13.5□□□□□ -0.25
MSH5-201ENST00000375703 TBC1D3CQ6IPX1 549 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 TBC1D3Q8IZP1 549 aaPredicted RBP13.5□□□□□ -0.25
MSH5-201ENST00000375703 SAMD12Q8N8I0 201 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 OR4M1Q8NGD0 313 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 CREB3L1Q96BA8 519 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 CLIP3Q96DZ5 547 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 NDC1Q9BTX1 674 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 C1QTNF7Q9BXJ2 289 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 ZNF350Q9GZX5 532 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 GALNT9Q9HCQ5 603 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 FBXO34Q9NWN3 711 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 GDE1Q9NZC3 331 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 KLF15Q9UIH9 416 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 DAPP1Q9UN19 280 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 NPIPA5A0A0B4J1W7 369 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 A0A1B0GVC2 190 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 A6NIN4 97 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 SLC22A31A6NKX4 558 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 E9PI62 339 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 NPIPA7E9PJI5 369 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 LANCL1O43813 399 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 PLOD3O60568 738 aa13.5□□□□□ -0.25
MSH5-201ENST00000375703 PAHP00439 452 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms