RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 DRD3P35462 400 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 BSGP35613 385 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 KRT20P35900 424 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 CHI3L1P36222 383 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 GGT2P36268 569 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 OPRD1P41143 372 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 FRKP42685 505 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 CRATP43155 626 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 MAGEA8P43361 318 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 XCR1P46094 333 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 CCR8P51685 355 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 ARFIP1P53367 373 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 TAS2R50P59544 299 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 DSTNP60981 165 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 DCAF7P61962 342 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 TRA2BP62995 288 aaKnown RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 RPP38P78345 283 aaKnown RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 CDK6Q00534 326 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 MC1RQ01726 317 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 EMX1Q04741 257 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 GPM6BQ13491 265 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 AQP6Q13520 282 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 ENPP2Q13822 863 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 TBCEQ15813 527 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 NPTX1Q15818 432 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 CTF1Q16619 201 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 DUSP6Q16828 381 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 UBE2UQ5VVX9 321 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 KHDRBS2Q5VWX1 349 aaKnown RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 SAXO2Q658L1 398 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 PNCKQ6P2M8 343 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 KLHL35Q6PF15 583 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 CLEC9AQ6UXN8 241 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 FAM92BQ6ZTR7 304 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 ADGRD2Q7Z7M1 963 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 GALNT5Q7Z7M9 940 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 MOGAT3Q86VF5 341 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 HEATR4Q86WZ0 1026 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 NUDT13Q86X67 352 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 CCDC71Q8IV32 467 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 MMAAQ8IVH4 418 aaKnown RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 ENTHD1Q8IYW4 607 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 RAB42Q8N4Z0 105 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 LSMEM1Q8N8F7 131 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 C11orf44Q8N8P7 122 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 DRAXINQ8NBI3 349 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 ZNF540Q8NDQ6 660 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 ZNF740Q8NDX6 193 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 OR5AR1Q8NGP9 310 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 NFKBIDQ8NI38 313 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 PSMA8Q8TAA3 256 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 SPPL2AQ8TCT8 520 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 GIPC3Q8TF64 312 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 APH1BQ8WW43 257 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 TRUB1Q8WWH5 349 aaKnown RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 THAP4Q8WY91 577 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 SMPDL3AQ92484 453 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 FCGR1BQ92637 280 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 TFGQ92734 400 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 FGF13Q92913 245 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 MAL2Q969L2 176 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 CIDECQ96AQ7 238 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 FAM131CQ96AQ9 280 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 NEURL3Q96EH8 262 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 PDXPQ96GD0 296 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 ZFYVE19Q96K21 471 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 CSF3RQ99062 836 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 TIMM29Q9BSF4 260 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 RAB11FIP5Q9BXF6 653 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 NLNQ9BYT8 704 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 OR51B5Q9H339 312 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 RMI1Q9H9A7 625 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 ANKHQ9HCJ1 492 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 A4GALTQ9NPC4 353 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 ACOT13Q9NPJ3 140 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 PRSS16Q9NQE7 514 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 MIEF1Q9NQG6 463 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 EXD2Q9NVH0 621 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 FKBP14Q9NWM8 211 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 TAAR2Q9P1P5 351 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 ERVK-18Q9QC07 812 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 SPASTQ9UBP0 616 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 WARS2Q9UGM6 360 aaKnown RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 KCND3Q9UK17 655 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 ACSL5Q9ULC5 683 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 PCYT1BQ9Y5K3 369 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 HEMK1Q9Y5R4 338 aaPredicted RBP4.46□□□□□ -1.7
USP48-202ENST00000374730 ENPP4Q9Y6X5 453 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 TICRRQ7Z2Z1 1910 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 REV3LO60673 3130 aa4.46□□□□□ -1.7
USP48-202ENST00000374730 C5orf42Q9H799 3197 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 LRP4O75096 1905 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 A0A1W2PPV9 198 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 TRBC2A0A5B9 178 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 OR2A25A4D2G3 310 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 TBC1D3BA6NDS4 549 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 FAM90A10PA6NDY2 464 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 ANKDD1BA6NHY2 528 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 CLDN24A6NM45 220 aa4.45□□□□□ -1.7
USP48-202ENST00000374730 PTGES3LE9PB15 166 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms