RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 GPX5O75715 221 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 SLITRK5O94991 958 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 PROS1P07225 676 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 NUDT1P36639 197 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 SLC15A1P46059 708 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 KRR1Q13601 381 aaKnown RBP16.96■□□□□ 0.31
RXRB-202ENST00000374685 PDZK1Q5T2W1 519 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 ZNF544Q6NX49 715 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 ZNF619Q8N2I2 560 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 OR4Q3Q8NH05 313 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 COQ7Q99807 217 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 B3GNT4Q9C0J1 378 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 NDOR1Q9UHB4 597 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 CAB39Q9Y376 341 aaPredicted RBP16.96■□□□□ 0.31
RXRB-202ENST00000374685 SPEF1Q9Y4P9 236 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 ZC3H12DA2A288 527 aaKnown RBP16.96■□□□□ 0.3
RXRB-202ENST00000374685 TGFBR3LH3BV60 316 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 POLR1CO15160 346 aaPredicted RBP16.96■□□□□ 0.3
RXRB-202ENST00000374685 ATP1B1P05026 303 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 GSTM3P21266 225 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 ALAS2P22557 587 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 CD79BP40259 229 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 SLC16A1P53985 500 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 POU6F2P78424 691 aaPredicted RBP16.96■□□□□ 0.3
RXRB-202ENST00000374685 TSPAN31Q12999 210 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 NDUFA9Q16795 377 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 NDUFAF6Q330K2 333 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 FHL5Q5TD97 284 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 CCBE1Q6UXH8 406 aaPredicted RBP16.96■□□□□ 0.3
RXRB-202ENST00000374685 PRSS58Q8IYP2 241 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 CDRT4Q8N9R6 151 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 PSD4Q8NDX1 1056 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 OR4F15Q8NGB8 312 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 POLDIP3Q9BY77 421 aaKnown RBP16.96■□□□□ 0.3
RXRB-202ENST00000374685 MED20Q9H944 212 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 HHATLQ9HCP6 504 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 UCKL1Q9NWZ5 548 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 LRP4O75096 1905 aa16.96■□□□□ 0.3
RXRB-202ENST00000374685 CENPXA8MT69 81 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 A8MUA0 341 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 TBX1O43435 398 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 MTRF1O75570 445 aaKnown RBP16.95■□□□□ 0.3
RXRB-202ENST00000374685 ZNF136P52737 540 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 CDK5Q00535 292 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 GATAD2AQ86YP4 633 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 C9orf43Q8TAL5 461 aaPredicted RBP16.95■□□□□ 0.3
RXRB-202ENST00000374685 RIT1Q92963 219 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 TRMT61AQ96FX7 289 aaKnown RBP16.95■□□□□ 0.3
RXRB-202ENST00000374685 SPACA7Q96KW9 195 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 ART5Q96L15 291 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 SLC38A2Q96QD8 506 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 ZNF350Q9GZX5 532 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 SPIN1Q9Y657 262 aaPredicted RBP16.95■□□□□ 0.3
RXRB-202ENST00000374685 RGS5O15539 181 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 GMFGO60234 142 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 CBX7O95931 251 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 SAGP10523 405 aaPredicted RBP16.95■□□□□ 0.3
RXRB-202ENST00000374685 IFI30P13284 250 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 MLLT3P42568 568 aaPredicted RBP16.95■□□□□ 0.3
RXRB-202ENST00000374685 GCGRP47871 477 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 OR1Q1Q15612 314 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 ZFP69Q49AA0 526 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 PRAMEF8Q5VWM4 474 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 PRAMEF7Q5VXH5 474 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 IDO2Q6ZQW0 420 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 RANBP3LQ86VV4 465 aaPredicted RBP16.95■□□□□ 0.3
RXRB-202ENST00000374685 CADM2Q8N3J6 435 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 AMER2Q8N7J2 671 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 OR51A7Q8NH64 312 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 CNOT9Q92600 299 aaKnown RBP16.95■□□□□ 0.3
RXRB-202ENST00000374685 TBX5Q99593 518 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 ENKD1Q9H0I2 346 aa16.95■□□□□ 0.3
RXRB-202ENST00000374685 IGHV5-51A0A0C4DH38 117 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 AGR2O95994 175 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 MYL12AP19105 171 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 EEF1A1P68104 462 aaKnown RBP16.94■□□□□ 0.3
RXRB-202ENST00000374685 CTAG1AP78358 180 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 DUSP8Q13202 625 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 ELOCQ15369 112 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 GATSQ8NAP1 163 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 SNTG1Q9NSN8 517 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 DDX28Q9NUL7 540 aaKnown RBP16.94■□□□□ 0.3
RXRB-202ENST00000374685 ALPK2Q86TB3 2170 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 TMCC2O75069 709 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 RAB38P57729 211 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 TEKQ02763 1124 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 MGAT2Q10469 447 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 SMAD4Q13485 552 aaKnown RBP16.94■□□□□ 0.3
RXRB-202ENST00000374685 C1DQ13901 141 aaKnown RBP16.94■□□□□ 0.3
RXRB-202ENST00000374685 ATCAYQ86WG3 371 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 FAM26EQ8N5C1 309 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 KBTBD8Q8NFY9 601 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 OR9Q1Q8NGQ5 310 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 RELTQ969Z4 430 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 MND1Q9BWT6 205 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 CDADC1Q9BWV3 514 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 COL4A2P08572 1712 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 RP1P56715 2156 aa16.94■□□□□ 0.3
RXRB-202ENST00000374685 FAM25AB3EWG3 89 aa16.93■□□□□ 0.3
RXRB-202ENST00000374685 FAM25CB3EWG5 89 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms