RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 MED1Q15648 1581 aaPredicted RBP10.86□□□□□ -0.67
VCL-202ENST00000372755 ZNF705FA8MVS1 300 aaPredicted RBP10.86□□□□□ -0.67
VCL-202ENST00000372755 PTHP01270 115 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 ZNF705DP0CH99 300 aaPredicted RBP10.86□□□□□ -0.67
VCL-202ENST00000372755 ZNF705BP0CI00 300 aaPredicted RBP10.86□□□□□ -0.67
VCL-202ENST00000372755 PKLRP30613 574 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 MAGEA6P43360 314 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 ATP1B3P54709 279 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 CDK5R2Q13319 367 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 ARHGAP19Q14CB8 494 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 MEX3BQ6ZN04 569 aaKnown RBP10.86□□□□□ -0.67
VCL-202ENST00000372755 TPRA1Q86W33 373 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 STEAP2Q8NFT2 490 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 ELMOD3Q96FG2 381 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 SENP5Q96HI0 755 aaPredicted RBP10.86□□□□□ -0.67
VCL-202ENST00000372755 SDR39U1Q9NRG7 319 aaPredicted RBP10.86□□□□□ -0.67
VCL-202ENST00000372755 HEBP1Q9NRV9 189 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 C5AR2Q9P296 337 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 TMEM181Q9P2C4 612 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 RDH16O75452 317 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 MSR1P21757 451 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 ETV4P43268 484 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 SLC15A4Q8N697 577 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 SDR9C7Q8NEX9 313 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 NT5C3BQ969T7 300 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 KCNJ16Q9NPI9 418 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 VDAC3Q9Y277 283 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 MYO5BQ9ULV0 1848 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 ROBO1Q9Y6N7 1651 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 M0QZQ0 153 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 ZNF780AO75290 641 aaPredicted RBP10.86□□□□□ -0.67
VCL-202ENST00000372755 DCTP40126 519 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 JAG1P78504 1218 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 PLCXD3Q63HM9 321 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 RDH10Q8IZV5 341 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 KDM1BQ8NB78 822 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 MYLIPQ8WY64 445 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 ZNF337Q9Y3M9 751 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 G3V2L1 256 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 SGK494L7N484 410 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 GABRR1P24046 479 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 GDF1P27539 372 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 DYRK1AQ13627 763 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 CMPK2Q5EBM0 449 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 LETMD1Q6P1Q0 360 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 RANBP10Q6VN20 620 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 IGFN1Q86VF2 1251 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 PRR22Q8IZ63 422 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 CYB561A3Q8NBI2 242 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 PTRH2Q9Y3E5 179 aaKnown RBP10.85□□□□□ -0.67
VCL-202ENST00000372755 A0A0U1RQK1 487 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 ANKRD34BA5PLL1 514 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 UPK1BO75841 260 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 FBXO45P0C2W1 286 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 CPOXP36551 454 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 TMEM184AQ6ZMB5 413 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 Q6ZSR6 202 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 SULF2Q8IWU5 870 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 TCEAL8Q8IYN2 117 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 SLC22A7Q9Y694 548 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 CA5AP35218 305 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 ETV5P41161 510 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 SNRPD2P62316 118 aaKnown RBP10.85□□□□□ -0.67
VCL-202ENST00000372755 LSAMPQ13449 338 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 STK11Q15831 433 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 MKXQ8IYA7 352 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 ESX1Q8N693 406 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 BRIX1Q8TDN6 353 aaKnown RBP10.85□□□□□ -0.67
VCL-202ENST00000372755 UPRTQ96BW1 309 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 GLTPQ9NZD2 209 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 GNG13Q9P2W3 67 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 CSNK1G3Q9Y6M4 447 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 ZCWPW2A0A1B0GU75 182 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 CDK1P06493 297 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 CHRNB1P11230 501 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 PEA15Q15121 130 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 C15orf39Q6ZRI6 1047 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 MRPL10Q7Z7H8 261 aaKnown RBP10.85□□□□□ -0.67
VCL-202ENST00000372755 ADAMTS14Q8WXS8 1223 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 SDSLQ96GA7 329 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 ZNF419Q96HQ0 510 aaPredicted RBP10.85□□□□□ -0.67
VCL-202ENST00000372755 ZNF778Q96MU6 729 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 PAAF1Q9BRP4 392 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 THAP7Q9BT49 309 aaPredicted RBP10.85□□□□□ -0.67
VCL-202ENST00000372755 HIPK2Q9H2X6 1198 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 RPS10P5Q9NQ39 176 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 TESQ9UGI8 421 aaKnown RBP10.85□□□□□ -0.67
VCL-202ENST00000372755 HHLA2Q9UM44 414 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 A0A1W2PPV4 95 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 NPIPB15A6NHN6 443 aaPredicted RBP10.85□□□□□ -0.67
VCL-202ENST00000372755 ARPC1BO15143 372 aaKnown RBP10.85□□□□□ -0.67
VCL-202ENST00000372755 ZNF254O75437 659 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 RFPL3O75679 317 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 TIMP2P16035 220 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 EEF1A1P68104 462 aaKnown RBP10.85□□□□□ -0.67
VCL-202ENST00000372755 GTDC1Q4AE62 458 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 KDELC1Q6UW63 502 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 TECPR1Q7Z6L1 1165 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 OR4D6Q8NGJ1 314 aa10.85□□□□□ -0.67
VCL-202ENST00000372755 DUSP23Q9BVJ7 150 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms