RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 GALNT6Q8NCL4 622 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 OR51A7Q8NH64 312 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 GRHL3Q8TE85 626 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 SENP5Q96HI0 755 aaPredicted RBP16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 OR51V1Q9H2C8 321 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 PCOLCE2Q9UKZ9 415 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 A6NCN8 305 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 CCDC182A6NF36 153 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 TNFSF14O43557 240 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 BMP7P18075 431 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 PPP1CAP62136 330 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 SRSF5Q13243 272 aaKnown RBP16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 EIPR1Q53HC9 387 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 EOGTQ5NDL2 527 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 FHL5Q5TD97 284 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 TMEM91Q6ZNR0 172 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 OR13C2Q8NGS9 318 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 ATF6BQ99941 703 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 SAGP10523 405 aaPredicted RBP16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 RPS7P62081 194 aaKnown RBP16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 HYAL1Q12794 435 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 ASAH1Q13510 395 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF362Q5T0B9 420 aaPredicted RBP16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 PPP2R2DQ66LE6 453 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 GLCCI1Q86VQ1 547 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 HS6ST2Q96MM7 605 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 NKX2-4Q9H2Z4 354 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 TCEAL2Q9H3H9 227 aaPredicted RBP16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 CLDND1Q9NY35 253 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF223Q9UK11 482 aaPredicted RBP16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 HCRTR1O43613 425 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 MRPL3P09001 348 aaKnown RBP16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 NID1P14543 1247 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 CTHP32929 405 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 TBRG1Q3YBR2 411 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF438Q7Z4V0 828 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 Q8N402 240 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 ACBD7Q8N6N7 88 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 OR10H4Q8NGA5 316 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 OR52L1Q8NGH7 329 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 IFT27Q9BW83 186 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 BEX2Q9BXY8 128 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 USP36Q9P275 1121 aaKnown RBP16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 SPTBP11277 2137 aa16.79■□□□□ 0.28
UBQLN4-201ENST00000368309 TRAV27A0A087WT01 109 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 CDHR4A6H8M9 788 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 CHST10O43529 356 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 DBIP07108 87 aaKnown RBP16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 KIR2DL3P43628 341 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 DLX2Q07687 328 aaPredicted RBP16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 IL18Q14116 193 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 DTX3Q8N9I9 347 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 PTP4A1Q93096 173 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 ST6GAL2Q96JF0 529 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 KRCC1Q9NPI7 259 aaPredicted RBP16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 HRASLS2Q9NWW9 162 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 TTC36A6NLP5 189 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 SGK494L7N484 410 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 CTSBP07858 339 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 THBS1P07996 1170 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 ATXN8OSP0DMR3 200 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 CLUP10909 449 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 SLC2A2P11168 524 aaPredicted RBP16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 TMEM44Q2T9K0 475 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 CYB561A3Q8NBI2 242 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 OR52N1Q8NH53 320 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 ALG8Q9BVK2 526 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 RBCK1Q9BYM8 510 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 MAT2BQ9NZL9 334 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 NPAP1Q9NZP6 1156 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 B4DXG7 233 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 BHLHE40O14503 412 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 GPR75O95800 540 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF10P21506 573 aaPredicted RBP16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 TBXA2RP21731 343 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 HNRNPA2B1P22626 353 aaKnown RBP16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 TCEA1P23193 301 aaKnown RBP16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 NIPAL3Q6P499 406 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 DGAT2L6Q6ZPD8 337 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 MEPCEQ7L2J0 689 aaKnown RBP16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 TOR1AIP2Q8NFQ8 470 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 UBASH3BQ8TF42 649 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 DNAJA4Q8WW22 397 aaPredicted RBP16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 BPIFA2Q96DR5 249 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 RNF32Q9H0A6 362 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 NUFIP1Q9UHK0 495 aaKnown RBP16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 FBXL4Q9UKA2 621 aa16.78■□□□□ 0.28
UBQLN4-201ENST00000368309 CYR61O00622 381 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 RFPL3O75679 317 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 APBB3O95704 486 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 VSX2P58304 361 aaPredicted RBP16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 PPP3R1P63098 170 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 Q6ZSR6 202 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 CDRT4Q8N9R6 151 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 BRIX1Q8TDN6 353 aaKnown RBP16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 TIMP4Q99727 224 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 BOLA1Q9Y3E2 137 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 IDH3BO43837 385 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 HOXC4P09017 264 aaPredicted RBP16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 CTBP2P56545 445 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms