RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 ZNF764Q96H86 408 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-202ENST00000367279 RNF170Q96K19 258 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 SLA2Q9H6Q3 261 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 BEX1Q9HBH7 125 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 TRIM36Q9NQ86 728 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 SIDT1Q9NXL6 827 aaKnown RBP11.47□□□□□ -0.57
PTPN7-202ENST00000367279 TBC1D29Q9UFV1 150 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 PCDHGB7Q9Y5F8 929 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 LTBP2Q14767 1821 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 LINC01553A4QN01 128 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 RNGTTO60942 597 aaKnown RBP11.47□□□□□ -0.57
PTPN7-202ENST00000367279 OR5F1O95221 314 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 EIF4EP06730 217 aaKnown RBP11.47□□□□□ -0.57
PTPN7-202ENST00000367279 TRAPPC2P0DI81 140 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 TRAPPC2BP0DI82 140 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 POLR2CP19387 275 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-202ENST00000367279 TLX1P31314 330 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-202ENST00000367279 EVI2BP34910 448 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 ABATP80404 500 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 E2F1Q01094 437 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 SF3A2Q15428 464 aaKnown RBP11.47□□□□□ -0.57
PTPN7-202ENST00000367279 TMEM44Q2T9K0 475 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 MEPCEQ7L2J0 689 aaKnown RBP11.47□□□□□ -0.57
PTPN7-202ENST00000367279 TMEM239Q8WW34 195 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 SNAPC3Q92966 411 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 TSACCQ96A04 125 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-202ENST00000367279 GIMAP5Q96F15 307 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 RIPOR3Q96MK2 946 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 PPIL3Q9H2H8 161 aaKnown RBP11.47□□□□□ -0.57
PTPN7-202ENST00000367279 TMEM74BQ9NUR3 256 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 FBXL4Q9UKA2 621 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 COLEC10Q9Y6Z7 277 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 GRXCR1A8MXD5 290 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 CENPBD1B2RD01 187 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 OR2B3O76000 313 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 ZGLP1P0C6A0 271 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 PYCR1P32322 319 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 IGFALSP35858 605 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 ACTR1BP42025 376 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 ACTR1AP61163 376 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 OR1Q1Q15612 314 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 EOGTQ5NDL2 527 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 CD200R1LQ6Q8B3 271 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 WDR88Q6ZMY6 472 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 PRR23CQ6ZRP0 262 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 NR2C2APQ86WQ0 139 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 OR52N1Q8NH53 320 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 RFT1Q96AA3 541 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 C4orf36Q96KX1 117 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 HS6ST2Q96MM7 605 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 TIMM29Q9BSF4 260 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 THAP7Q9BT49 309 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-202ENST00000367279 APOOQ9BUR5 198 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 C1QTNF2Q9BXJ5 285 aa11.47□□□□□ -0.57
PTPN7-202ENST00000367279 LYARQ9NX58 379 aaKnown RBP11.47□□□□□ -0.57
PTPN7-202ENST00000367279 SPTBP11277 2137 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 PTPRSQ13332 1948 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 A0A0B4J203 849 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 TRAPPC13A5PLN9 417 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 H0Y8X5 98 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 SLC19A2O60779 497 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 PPP1R3DO95685 299 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 APODP05090 189 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 PRKCAP17252 672 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 ERP29P30040 261 aaKnown RBP11.46□□□□□ -0.57
PTPN7-202ENST00000367279 ERVK-21P61565 698 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 RPS21P63220 83 aaKnown RBP11.46□□□□□ -0.57
PTPN7-202ENST00000367279 GALK2Q01415 458 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 NIPAL3Q6P499 406 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 LYPD8Q6UX82 237 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 VN1R4Q7Z5H5 301 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 GID4Q8IVV7 300 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 ZNF485Q8NCK3 441 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 NR4A3Q92570 626 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 TRIM63Q969Q1 353 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 SDF2Q99470 211 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 NDC1Q9BTX1 674 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 RBCK1Q9BYM8 510 aa11.46□□□□□ -0.57
PTPN7-202ENST00000367279 SCO2O43819 266 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 B3GALT2O43825 422 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 RASGRP1O95267 797 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 PVRP15151 417 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 HLA-DMAP28067 261 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 PPM1FP49593 454 aaPredicted RBP11.46□□□□□ -0.58
PTPN7-202ENST00000367279 OR12D2P58182 307 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 MAB21L1Q13394 359 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 GPR176Q14439 515 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 PRRT3Q5FWE3 981 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 C1orf53Q5VUE5 145 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 VASNQ6EMK4 673 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 THSD4Q6ZMP0 1018 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 MRGPREQ86SM8 312 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 GPR135Q8IZ08 494 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 OR4C6Q8NH72 309 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 GRPEL2Q8TAA5 225 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 AKAP1Q92667 903 aaKnown RBP eCLIP11.46□□□□□ -0.581e-5■■■■□ 24.5
PTPN7-202ENST00000367279 MKRN2Q9H000 416 aaKnown RBP11.46□□□□□ -0.58
PTPN7-202ENST00000367279 SLC28A3Q9HAS3 691 aa11.46□□□□□ -0.58
PTPN7-202ENST00000367279 EXOGQ9Y2C4 368 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms