RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 SLC30A3Q99726 388 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 CNTNAP3Q9BZ76 1288 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 ZFP57Q9NU63 452 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 A0A0B4J2A0 478 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 SGK494L7N484 410 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 SRPX2O60687 465 aaPredicted RBP15.11■□□□□ 0.01
COL18A1-203ENST00000359759 NDUFB2O95178 105 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 HRH2P25021 359 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 TSFMP43897 325 aaKnown RBP15.11■□□□□ 0.01
COL18A1-203ENST00000359759 FAM69AQ5T7M9 428 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 KCNIP4Q6PIL6 250 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 APOOLQ6UXV4 268 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 DTWD1Q8N5C7 304 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 GALNT9Q9HCQ5 603 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 SPATA6Q9NWH7 488 aaPredicted RBP15.11■□□□□ 0.01
COL18A1-203ENST00000359759 GFOD1Q9NXC2 390 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 SHPKQ9UHJ6 478 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 PIGBOS1A0A0B4J2F0 54 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 WASH4PA8MWX3 477 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 PIRO00625 290 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 HSD17B1P14061 328 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 CDS1Q92903 461 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 MICU1Q9BPX6 476 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 RETREG1Q9H6L5 497 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 TCHHQ07283 1943 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 FUT1P19526 365 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 HHEXQ03014 270 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 ALKAL2Q6UX46 152 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 DNAJC22Q8N4W6 341 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 GPR148Q8TDV2 347 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 NRG4Q8WWG1 115 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 L3HYPDHQ96EM0 354 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 POLHQ9Y253 713 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 SPATA31D1Q6ZQQ2 1576 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 DOK2O60496 412 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 PROX2Q3B8N5 592 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 ZNF836Q6ZNA1 936 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 SLC29A1Q99808 456 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 PINK1Q9BXM7 581 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 NID2Q14112 1375 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 ANKRD34BA5PLL1 514 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 PRPS1P60891 318 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 PLAG1Q6DJT9 500 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 PARP16Q8N5Y8 322 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 C17orf113A0A1B0GUU1 675 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 ANKRD30BLA7E2S9 258 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 HLA-AP01891 365 aaKnown RBP15.1■□□□□ 0.01
COL18A1-203ENST00000359759 UBE2KP61086 200 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 TANGO2Q6ICL3 276 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 TSSK4Q6SA08 328 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 GOLM1Q8NBJ4 401 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 BRIX1Q8TDN6 353 aaKnown RBP15.1■□□□□ 0.01
COL18A1-203ENST00000359759 MSI2Q96DH6 328 aaKnown RBP15.1■□□□□ 0.01
COL18A1-203ENST00000359759 ANKRD60Q9BZ19 345 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 PCDHA9Q9Y5H5 950 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 SURF4O15260 269 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 LDB3O75112 727 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 RNF151Q2KHN1 245 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 MOB3CQ70IA8 216 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 OR5AR1Q8NGP9 310 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 BMFQ96LC9 184 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 BMP2P12643 396 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 OMGP23515 440 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 MRPS34P82930 218 aaKnown RBP15.1■□□□□ 0.01
COL18A1-203ENST00000359759 DEFA6Q01524 100 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 BCL7AQ4VC05 210 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 B3GNT8Q7Z7M8 397 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 LRRC18Q8N456 261 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 EHFQ9NZC4 300 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 ASB4Q9Y574 426 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 ARHGEF28Q8N1W1 1705 aaKnown RBP15.1■□□□□ 0.01
COL18A1-203ENST00000359759 J3KTA2 159 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 SNNO75324 88 aaPredicted RBP15.1■□□□□ 0.01
COL18A1-203ENST00000359759 SCAF4O95104 1147 aaKnown RBP15.1■□□□□ 0.01
COL18A1-203ENST00000359759 GABRA2P47869 451 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 CXADRP78310 365 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 TDGQ13569 410 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 GK3PQ14409 553 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 ZNF546Q86UE3 836 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 WDTC1Q8N5D0 677 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 TBC1D20Q96BZ9 403 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 ELP4Q96EB1 424 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 TXN2Q99757 166 aa15.1■□□□□ 0.01
COL18A1-203ENST00000359759 GCH1P30793 250 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 TAP2Q03519 686 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 KEAP1Q14145 624 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 KCNJ8Q15842 424 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 NIPAL3Q6P499 406 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 SPARTQ8N0X7 666 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 FAM183AA6NL82 134 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 CD6P30203 668 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 DAP3P51398 398 aaKnown RBP15.09■□□□□ 0.01
COL18A1-203ENST00000359759 TNK1Q13470 666 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 SPCS2Q15005 226 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 C3orf38Q5JPI3 329 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 SBSNQ6UWP8 590 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 ZNF765Q7L2R6 523 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 OR51D1Q8NGF3 324 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 TMEM239Q8WW34 195 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 MS4A4EQ96PG1 132 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms