RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 COMMD7Q86VX2 200 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 C11orf65Q8NCR3 313 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 ZNF431Q8TF32 576 aaPredicted RBP17.31■□□□□ 0.36
SNX11-201ENST00000359238 GTPBP3Q969Y2 492 aaKnown RBP17.31■□□□□ 0.36
SNX11-201ENST00000359238 UCKL1Q9NWZ5 548 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 ATP6V1G2-DDX39BF2Z307 99 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 PCDH17O14917 1159 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 BCAT2O15382 392 aaPredicted RBP17.31■□□□□ 0.36
SNX11-201ENST00000359238 PLOD3O60568 738 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 TBX19O60806 448 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 RECKO95980 971 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 POU2F1P14859 743 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 UQCRC2P22695 453 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 PPIBP23284 216 aaKnown RBP17.31■□□□□ 0.36
SNX11-201ENST00000359238 LIMS1P48059 325 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 GALEQ14376 348 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 TMEM201Q5SNT2 666 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 GCNT6Q5T4J0 391 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 CEACAM20Q6UY09 585 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 PLEKHM3Q6ZWE6 761 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 SZRD1Q7Z422 152 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 DNASE2BQ8WZ79 361 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 OR5P2Q8WZ92 322 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 CREB3L1Q96BA8 519 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 GFM1Q96RP9 751 aaKnown RBP17.31■□□□□ 0.36
SNX11-201ENST00000359238 KCNJ15Q99712 375 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 YIPF4Q9BSR8 244 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 TMEM43Q9BTV4 400 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 FOLH1BQ9HBA9 442 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 SLC35C2Q9NQQ7 365 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 CDH10Q9Y6N8 788 aa17.31■□□□□ 0.36
SNX11-201ENST00000359238 H0YGG7 62 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 ST6GAL1P15907 406 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 HMGA2P52926 109 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 ARF3P61204 181 aaPredicted RBP17.3■□□□□ 0.36
SNX11-201ENST00000359238 RPS15AP62244 130 aaKnown RBP17.3■□□□□ 0.36
SNX11-201ENST00000359238 BTG1P62324 171 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 RUNX2Q13950 521 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 LTB4RQ15722 352 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 COL28A1Q2UY09 1125 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 C22orf42Q6IC83 251 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 ZNF730Q6ZMV8 503 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 C6orf120Q7Z4R8 191 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 PRSS42Q7Z5A4 293 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 OR4N5Q8IXE1 308 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 KCTD7Q96MP8 289 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 WFDC6Q9BQY6 131 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 DUSP15Q9H1R2 295 aaPredicted RBP17.3■□□□□ 0.36
SNX11-201ENST00000359238 RANBP3Q9H6Z4 567 aaPredicted RBP17.3■□□□□ 0.36
SNX11-201ENST00000359238 CIB4A0PJX0 185 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 HK1P19367 917 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 NCBP2P52298 156 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNX11-201ENST00000359238 CDK6Q00534 326 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 SIGLEC14Q08ET2 396 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 RIN1Q13671 783 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 CLLU1Q5K131 121 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 GKN2Q86XP6 184 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 OR5T3Q8NGG3 340 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 NEURL3Q96EH8 262 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 TM9SF2Q99805 663 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 NLNQ9BYT8 704 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 HEXA-AS1Q9H8Q6 139 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 B3GAT2Q9NPZ5 323 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 ACER3Q9NUN7 267 aa17.3■□□□□ 0.36
SNX11-201ENST00000359238 ARID1BQ8NFD5 2236 aaPredicted RBP17.29■□□□□ 0.36
SNX11-201ENST00000359238 TECTAO75443 2155 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 A0A1B0GVT2 93 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 ARRDC5A6NEK1 342 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 SGK494L7N484 410 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 AFF3P51826 1226 aaKnown RBP17.29■□□□□ 0.36
SNX11-201ENST00000359238 LRRC74AQ0VAA2 488 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 FOXD4Q12950 439 aaPredicted RBP17.29■□□□□ 0.36
SNX11-201ENST00000359238 MADCAM1Q13477 382 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 KLHL22Q53GT1 634 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 GPR139Q6DWJ6 353 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 CNIH2Q6PI25 160 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 WDR53Q7Z5U6 358 aaPredicted RBP17.29■□□□□ 0.36
SNX11-201ENST00000359238 TBC1D19Q8N5T2 526 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 BAHD1Q8TBE0 780 aaPredicted RBP17.29■□□□□ 0.36
SNX11-201ENST00000359238 TMEM163Q8TC26 289 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 SLC38A5Q8WUX1 472 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 ZFPM2Q8WW38 1151 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 PMEPA1Q969W9 287 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 KATNB1Q9BVA0 655 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 PPA2Q9H2U2 334 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 IL21RQ9HBE5 538 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 TAS2R7Q9NYW3 318 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 PTTG3PQ9NZH4 202 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 ZNF224Q9NZL3 707 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 MGAT4AQ9UM21 535 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 RPL36Q9Y3U8 105 aaKnown RBP17.29■□□□□ 0.36
SNX11-201ENST00000359238 C2orf74A8MZ97 194 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 J3KTA2 159 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 HMGN4O00479 90 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 BCHEP06276 602 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 SMIM10L1P0DMW3 83 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 ARAFP10398 606 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 CPEP16870 476 aa17.29■□□□□ 0.36
SNX11-201ENST00000359238 DHPSP49366 369 aaPredicted RBP17.29■□□□□ 0.36
SNX11-201ENST00000359238 CCT3P49368 545 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms