RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 TSSK2Q96PF2 358 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 ASF1BQ9NVP2 202 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 PLEK2Q9NYT0 353 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 CNOT2Q9NZN8 540 aaKnown RBP6.09□□□□□ -1.43
UPF2-201ENST00000356352 OR6C2Q9NZP2 312 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 HSFX1Q9UBD0 423 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 ADAMTS6Q9UKP5 1117 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 HHLA2Q9UM44 414 aa6.09□□□□□ -1.43
UPF2-201ENST00000356352 A0A1W2PPV4 95 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 WASH4PA8MWX3 477 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 H3BML4 177 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 GALR3O60755 368 aaPredicted RBP6.09□□□□□ -1.44
UPF2-201ENST00000356352 SERPINA7P05543 415 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 PRKACBP22694 351 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 SFTPDP35247 375 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 ERVPABLB-1P60509 514 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 ZNF674Q2M3X9 581 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 AARDQ4LEZ3 155 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 RTP2Q5QGT7 225 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 Q6ZSR6 202 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 FAM160A2Q8N612 972 aaPredicted RBP6.09□□□□□ -1.44
UPF2-201ENST00000356352 OR5T1Q8NG75 326 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 SYNPRQ8TBG9 265 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 APIPQ96GX9 242 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 ZNF419Q96HQ0 510 aaPredicted RBP6.09□□□□□ -1.44
UPF2-201ENST00000356352 LMAN1LQ9HAT1 526 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 SMOXQ9NWM0 555 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 MRPL15Q9P015 296 aaKnown RBP6.09□□□□□ -1.44
UPF2-201ENST00000356352 TESQ9UGI8 421 aaKnown RBP6.09□□□□□ -1.44
UPF2-201ENST00000356352 CBLCQ9ULV8 474 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 WIF1Q9Y5W5 379 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 PHLPP1O60346 1717 aa6.09□□□□□ -1.44
UPF2-201ENST00000356352 IFT172Q9UG01 1749 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 hCG_1809904A0A1W2PP81 198 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 A0A1W2PPE2 198 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 A0A1W2PPH5 198 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 A0A1W2PQL4 384 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 A0A1W2PR64 198 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 A0A1W2PRV1 198 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 OR5K3A6NET4 321 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 F5H5K5 113 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 STK17BO94768 372 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 TOXO94900 526 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 TIMP2P16035 220 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 VEGFCP49767 419 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 RRADP55042 308 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 TAS2R19P59542 299 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 SOX4Q06945 474 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 CEACAM7Q14002 265 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 ZNF542PQ5EBM4 170 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 TMEM184AQ6ZMB5 413 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 CYP4V2Q6ZWL3 525 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 ANKLE1Q8NAG6 615 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 OR52B6Q8NGF0 335 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 BRIX1Q8TDN6 353 aaKnown RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 MUCL1Q96DR8 90 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 ZNF578Q96N58 590 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 ST6GALNAC5Q9BVH7 336 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 ZNF286AQ9HBT8 521 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 POLE4Q9NR33 117 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 THSD1Q9NS62 852 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 ADAM29Q9UKF5 820 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 FMN2Q9NZ56 1722 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 UBFD1O14562 309 aaKnown RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 BCAS1O75363 584 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 RDH16O75452 317 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 ITGB2P05107 769 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 IL32P24001 234 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 PIGFQ07326 219 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 TP53I3Q53FA7 332 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 UBE2NLQ5JXB2 153 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 PLAG1Q6DJT9 500 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 ASRGL1Q7L266 308 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 ZNF551Q7Z340 670 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 ISCA2Q86U28 154 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 ZNF808Q8N4W9 903 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 OR1J4Q8NGS1 313 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 NETO1Q8TDF5 533 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 UHRF2Q96PU4 802 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 ZNF300Q96RE9 604 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 TCEAL7Q9BRU2 100 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 ANKRD60Q9BZ19 345 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 TPSD1Q9BZJ3 242 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 METTL9Q9H1A3 318 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 GCM1Q9NP62 436 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 KCNJ16Q9NPI9 418 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 SLCO3A1Q9UIG8 710 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 IER3IP1Q9Y5U9 82 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 A0A1W2PS29 197 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 GAPDHSO14556 408 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 ADAM23O75077 832 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 EIF4EP06730 217 aaKnown RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 UBBP0CG47 229 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 UBCP0CG48 685 aaKnown RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 HOXD13P35453 343 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 HTR2BP41595 481 aa6.08□□□□□ -1.44
UPF2-201ENST00000356352 VASPP50552 380 aaPredicted RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 RPS27AP62979 156 aaKnown RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 UBA52P62987 128 aaKnown RBP6.08□□□□□ -1.44
UPF2-201ENST00000356352 EEF1A1P68104 462 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms