RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 LOC400499M0QZD8 3231 aa3.61□□□□□ -1.83
CNOT4-202ENST00000356162 NPIPA5A0A0B4J1W7 369 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 LOC100289279A0A1B0GTE1 492 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 C7orf72A4D263 438 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 NPIPA7E9PJI5 369 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CLIC1O00299 241 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 PRRG2O14669 202 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 MRASO14807 208 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 NDUFB5O43674 189 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 EIF4E2O60573 245 aaKnown RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 SLC19A2O60779 497 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 SHOX2O60902 331 aaPredicted RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CBR3O75828 277 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CHRM4P08173 479 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CELA3AP09093 270 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 RFPL3SP0C7P2 107 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 NPIPA8P0DM63 369 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 UBL4AP11441 157 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 HPGDP15428 266 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 PRDX6P30041 224 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 PTGS2P35354 604 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 PTGER4P35408 488 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CRISP3P54108 245 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 DSCR4P56555 118 aaPredicted RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 HSF1Q00613 529 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 STX5Q13190 355 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 NFYCQ13952 458 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 FGFBP1Q14512 234 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 RGNQ15493 299 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 ZSWIM7Q19AV6 140 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 LIN52Q52LA3 116 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 GPAT3Q53EU6 434 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 KLHL26Q53HC5 615 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 RUNDC3AQ59EK9 446 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 FAM91A1Q658Y4 838 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 TYW3Q6IPR3 259 aaKnown RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 NET1Q7Z628 596 aaPredicted RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CPLX4Q7Z7G2 160 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 GALNT10Q86SR1 603 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 MARCH3Q86UD3 253 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 SNX32Q86XE0 403 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 SLC30A8Q8IWU4 369 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CMIPQ8IY22 773 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 ANKFN1Q8N957 763 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 WDSUB1Q8N9V3 476 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 FAM71CQ8NEG0 241 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 BBS10Q8TAM1 723 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 PNPT1Q8TCS8 783 aaKnown RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 XAGE5Q8WWM1 108 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 RAB8BQ92930 207 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 C1GALT1C1Q96EU7 318 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 AURKBQ96GD4 344 aaPredicted RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CGREF1Q99674 301 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 ELAC2Q9BQ52 826 aaKnown RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 SPATA9Q9BWV2 254 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 TMPRSS13Q9BYE2 586 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 DEFB127Q9H1M4 99 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 MYLK2Q9H1R3 596 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 SLC38A1Q9H2H9 487 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 TP63Q9H3D4 680 aaPredicted RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 DSN1Q9H410 356 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 EXO5Q9H790 373 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 PTGES2Q9H7Z7 377 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CACYBPQ9HB71 228 aaKnown RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 FBXO34Q9NWN3 711 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 SLC25A37Q9NYZ2 338 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 SPRR3Q9UBC9 169 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 FBXL2Q9UKC9 423 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 OSGIN2Q9Y236 505 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 SLC35A3Q9Y2D2 325 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 LAMA5O15230 3695 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 NUP214P35658 2090 aaPredicted RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 C15orf38-AP3S2A0A0A6YYH1 394 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 A0A1B0GTH9 108 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 PRAMEF27A3QJZ7 478 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 SERINC4A6NH21 518 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 EVPLLA8MZ36 301 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 PYCARD-AS1I3L0S3 204 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 FBP2O00757 339 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 WDR1O75083 606 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 H6PDO95479 791 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 ACTL6AO96019 429 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 NPPAP01160 153 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 BCHEP06276 602 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 HOXD4P09016 255 aaPredicted RBP3.6□□□□□ -1.83
CNOT4-202ENST00000356162 NR2F1P10589 423 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 ETFAP13804 333 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 GABRA1P14867 456 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 HK1P19367 917 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CHMP24386 653 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 DPP4P27487 766 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 ELK4P28324 431 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CRATP43155 626 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 SEC24CP53992 1094 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 GYS2P54840 703 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CASP9P55211 416 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 ZNF117Q03924 483 aa3.6□□□□□ -1.83
CNOT4-202ENST00000356162 CRYZQ08257 329 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms