RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ZNF559Q9BR84 538 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 NDC1Q9BTX1 674 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 G6PC3Q9BUM1 346 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 CNPPD1Q9BV87 410 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 ITPAQ9BY32 194 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 DSN1Q9H410 356 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 EGLN3Q9H6Z9 239 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 CAPN10Q9HC96 672 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF304Q9HCX3 659 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 SLC22A11Q9NSA0 550 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 FGF21Q9NSA1 209 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 IRAK4Q9NWZ3 460 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 TVP23BQ9NYZ1 205 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 FLRT3Q9NZU0 649 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 DHCR7Q9UBM7 475 aaKnown RBP6.39□□□□□ -1.39
TRIM55-203ENST00000350034 WARS2Q9UGM6 360 aaKnown RBP6.39□□□□□ -1.39
TRIM55-203ENST00000350034 CBLCQ9ULV8 474 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 RPL36Q9Y3U8 105 aaKnown RBP6.39□□□□□ -1.39
TRIM55-203ENST00000350034 CDH10Q9Y6N8 788 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 MAU2Q9Y6X3 613 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 TEP1Q99973 2627 aaKnown RBP6.39□□□□□ -1.39
TRIM55-203ENST00000350034 WDR87Q6ZQQ6 2873 aa6.39□□□□□ -1.39
TRIM55-203ENST00000350034 A0A1B0GWA3 101 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 SYNDIG1LA6NDD5 238 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 FRG2CA6NGY1 282 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 SERINC4A6NH21 518 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 EFCAB7A8K855 629 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 C17orf105B2RV13 164 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 KDM4EB2RXH2 506 aaPredicted RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 CDC42EP2O14613 210 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TO15178 435 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 SLC22A1O15245 554 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 LAMTOR5O43504 91 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 SIGLEC6O43699 453 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 CHP2O43745 196 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TLX2O43763 284 aaPredicted RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 MAN1A2O60476 641 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 IL33O95760 270 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 PTHP01270 115 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 IFNA16P05015 189 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 INHBBP09529 407 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 DBTP11182 482 aaKnown RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF182P17025 639 aaPredicted RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 FBLP22087 321 aaKnown RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 PSMB9P28065 219 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 LIPAP38571 399 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 RBM34P42696 430 aaKnown RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 GPR4P46093 362 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 PPM1FP49593 454 aaPredicted RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 FXYD6P3P58550 94 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 ACY1Q03154 408 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 CSTF1Q05048 431 aaKnown RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF91Q05481 1191 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 SPCS2Q15005 226 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 ELAVL1Q15717 326 aaKnown RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 CLPPQ16740 277 aaPredicted RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TIGD6Q17RP2 521 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 PGGHGQ32M88 737 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 KLHL26Q53HC5 615 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 SNAP47Q5SQN1 464 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 AADACL4Q5VUY2 407 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 RHBDD2Q6NTF9 364 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 GUSBP11Q6P575 273 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 CCDC81Q6ZN84 652 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TMPRSS11FQ6ZWK6 438 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 COX15Q7KZN9 410 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 RRM2BQ7LG56 351 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF550Q7Z398 422 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 RABEPKQ7Z6M1 372 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 P2RY8Q86VZ1 359 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 MEX3DQ86XN8 651 aaKnown RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 C1orf210Q8IVY1 113 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 GPR135Q8IZ08 494 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 STX19Q8N4C7 294 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 ZNF321PQ8N8H1 164 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 FAM71CQ8NEG0 241 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 OR4D9Q8NGE8 314 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 OR4C3Q8NH37 302 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TEX47Q8TBZ9 253 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TBC1D15Q8TC07 691 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TMEM163Q8TC26 289 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TMEM239Q8WW34 195 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 OSTF1Q92882 214 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TSLPQ969D9 159 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 ADIPOR1Q96A54 375 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 DACH2Q96NX9 599 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 PRRX2Q99811 253 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 DPYSL5Q9BPU6 564 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 DCUN1D5Q9BTE7 237 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TSSK6Q9BXA6 273 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TRIM2Q9C040 744 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TGIF2Q9GZN2 237 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 TMEM27Q9HBJ8 222 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 SLC24A3Q9HC58 644 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 FGF20Q9NP95 211 aaPredicted RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 KRCC1Q9NPI7 259 aaPredicted RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 MKKSQ9NPJ1 570 aaPredicted RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 MED17Q9NVC6 651 aa6.38□□□□□ -1.39
TRIM55-203ENST00000350034 SIDT1Q9NXL6 827 aaKnown RBP6.38□□□□□ -1.39
TRIM55-203ENST00000350034 DNAJC27Q9NZQ0 273 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms