RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 RFX3P48380 749 aa16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 LAMTOR1Q6IAA8 161 aa16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 MZT2AQ6P582 158 aa16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 FIGNL1Q6PIW4 674 aa16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 ZC3H14Q6PJT7 736 aaKnown RBP16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 PRR23CQ6ZRP0 262 aa16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 PRSS41Q7RTY9 318 aa16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 TCTE3Q8IZS6 198 aa16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 LRRC25Q8N386 305 aaPredicted RBP16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 OR13C2Q8NGS9 318 aa16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 LCN9Q8WX39 176 aa16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 KISS1RQ969F8 398 aaPredicted RBP16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 ZC3HAV1LQ96H79 300 aaKnown RBP16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 TEX12Q9BXU0 123 aa16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 KCMF1Q9P0J7 381 aa16.81■□□□□ 0.28
PTP4A3-202ENST00000349124 TRAV27A0A087WT01 109 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 RFPL3O75679 317 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 ALX3O95076 343 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 HMGN1P05114 100 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 EEF1A1P68104 462 aaKnown RBP16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 ACSM1Q08AH1 577 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 SF3A2Q15428 464 aaKnown RBP16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 BTBD16Q32M84 506 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 SLC25A35Q3KQZ1 300 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 CDC73Q6P1J9 531 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 MEPCEQ7L2J0 689 aaKnown RBP16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 GPR135Q8IZ08 494 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 SLC37A3Q8NCC5 494 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 OR5W2Q8NH69 310 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 ZFAND1Q8TCF1 268 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 SNAPC3Q92966 411 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 ABHD1Q96SE0 405 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 ANKRD19PQ9H560 264 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 POLHQ9Y253 713 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 BHLHE40O14503 412 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 CTSVO60911 334 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 ZNF780AO75290 641 aaPredicted RBP16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 RGS9O75916 674 aaPredicted RBP16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 OR12D2P58182 307 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 OR1Q1Q15612 314 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 MRPL2Q5T653 305 aaKnown RBP16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 MTFR2Q6P444 385 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 AMIGO1Q86WK6 493 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 FANK1Q8TC84 345 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 TIMM29Q9BSF4 260 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 SLC28A3Q9HAS3 691 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 USP36Q9P275 1121 aaKnown RBP16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 DPP7Q9UHL4 492 aa16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 ZNF223Q9UK11 482 aaPredicted RBP16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 MRPS2Q9Y399 296 aaKnown RBP16.8■□□□□ 0.28
PTP4A3-202ENST00000349124 POM121BA6NF01 834 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 J3QLW9 94 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 ZNF19P17023 458 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 THBS2P35442 1172 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 ADAM15Q13444 863 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 METAP1DQ6UB28 335 aaPredicted RBP16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 GJD3Q8N144 294 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 RFLNBQ8N5W9 214 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 CITED4Q96RK1 184 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 THAP7Q9BT49 309 aaPredicted RBP16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 C1QTNF2Q9BXJ5 285 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 SLC17A9Q9BYT1 436 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 RSPH9Q9H1X1 276 aaPredicted RBP16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 MED17Q9NVC6 651 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 CLDND1Q9NY35 253 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 KLHL21Q9UJP4 597 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 ZMIZ1Q9ULJ6 1067 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 SLC17A4Q9Y2C5 497 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 TMA7Q9Y2S6 64 aaKnown RBP16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 HSPB11Q9Y547 144 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 TRAV6A0A075B6T7 132 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 PRR19A6NJB7 356 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 NOTOA8MTQ0 251 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 H0Y8X5 98 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 EEF1E1O43324 174 aaKnown RBP16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 ERP29P30040 261 aaKnown RBP16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 RRAS2P62070 204 aaPredicted RBP16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 RUNX3Q13761 415 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 PRPF38BQ5VTL8 546 aaKnown RBP16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 RTL10Q7L3V2 364 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 KRT74Q7RTS7 529 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 CEACAM19Q7Z692 300 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 ZAR1Q86SH2 424 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 SRFBP1Q8NEF9 429 aaKnown RBP16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 OR4K14Q8NGD5 310 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 MS4A4EQ96PG1 132 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 CD180Q99467 661 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 TEAD3Q99594 435 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 COQ7Q99807 217 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 IFT27Q9BW83 186 aa16.79■□□□□ 0.28
PTP4A3-202ENST00000349124 LOC105369274A0A096LPK9 316 aa16.78■□□□□ 0.28
PTP4A3-202ENST00000349124 DUXAA6NLW8 204 aa16.78■□□□□ 0.28
PTP4A3-202ENST00000349124 FOXK2Q01167 660 aa16.78■□□□□ 0.28
PTP4A3-202ENST00000349124 EXOSC7Q15024 291 aaKnown RBP16.78■□□□□ 0.28
PTP4A3-202ENST00000349124 FAM205BPQ63HN1 556 aa16.78■□□□□ 0.28
PTP4A3-202ENST00000349124 SSX6Q7RTT6 188 aa16.78■□□□□ 0.28
PTP4A3-202ENST00000349124 PAQR7Q86WK9 346 aa16.78■□□□□ 0.28
PTP4A3-202ENST00000349124 OR4N4Q8N0Y3 316 aa16.78■□□□□ 0.28
PTP4A3-202ENST00000349124 ARL14Q8N4G2 192 aa16.78■□□□□ 0.28
PTP4A3-202ENST00000349124 TMEM52Q8NDY8 209 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms