RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ZFP90Q8TF47 636 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 OR10A5Q9H207 317 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 OR10A2Q9H208 303 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 B4DGG1 531 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 SERPINA5P05154 406 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 POU4F3Q15319 338 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 CCDC116Q8IYX3 515 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 CLDN19Q8N6F1 224 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 OR2A12Q8NGT7 310 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 NCDNQ9UBB6 729 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 BTNL2Q9UIR0 455 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 LOC102725191A0A1B0GVB3 256 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 KLRG2A4D1S0 409 aaPredicted RBP18.3■□□□□ 0.52
HDAC4-201ENST00000345617 LRIT2A6NDA9 550 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 TREML2Q5T2D2 321 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 PXT1Q8NFP0 134 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 ECHDC3Q96DC8 303 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 AGPAT2O15120 278 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 SEC14L5O43304 696 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 PHF19Q5T6S3 580 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 KIAA0895LQ68EN5 471 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 CMSS1Q9BQ75 279 aaKnown RBP18.3■□□□□ 0.52
HDAC4-201ENST00000345617 HRH4Q9H3N8 390 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 SLC35A3Q9Y2D2 325 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 CEPT1Q9Y6K0 416 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 TMEM212A6NML5 194 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 CAPNS1P04632 268 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 TGM4P49221 684 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 FLI1Q01543 452 aaPredicted RBP18.3■□□□□ 0.52
HDAC4-201ENST00000345617 ZMAT1Q5H9K5 638 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 KREMEN2Q8NCW0 462 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 PRRC1Q96M27 445 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 NMNAT2Q9BZQ4 307 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 ZNF395Q9H8N7 513 aaPredicted RBP18.3■□□□□ 0.52
HDAC4-201ENST00000345617 RANGRFQ9HD47 186 aaPredicted RBP18.3■□□□□ 0.52
HDAC4-201ENST00000345617 CACNA1IQ9P0X4 2223 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 NACAE9PAV3 2078 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 INHAP05111 366 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 C8orf89P0DMQ9 161 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 FASLGP48023 281 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 OR4C11Q6IEV9 310 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 OR6V1Q8N148 313 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 KCNRGQ8N5I3 272 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 CHRNA9Q9UGM1 479 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 A0A087WUU8 490 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 MPPED1O15442 326 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 HNRNPKP61978 463 aaKnown RBP eCLIP18.3■□□□□ 0.522e-6■■■■□ 19.5
HDAC4-201ENST00000345617 FOXK1P85037 733 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 C1orf87Q8N0U7 546 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 GPR137CQ8N3F9 429 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 PQLC3Q8N755 202 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 OR5L1Q8NGL2 311 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 PHYHIPQ92561 330 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 SGK3Q96BR1 496 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 INTS14Q96SY0 518 aa18.3■□□□□ 0.52
HDAC4-201ENST00000345617 TMEM82A0PJX8 343 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 IMPA2O14732 288 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 HMGB4Q8WW32 186 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 TRBV23OR9-2A0A075B6M9 112 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 hCG_1807616A0A1W2PRN6 198 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 OR4Q2P0C623 313 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 NOGQ13253 232 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 CEACAM7Q14002 265 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 RADILQ96JH8 1075 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 H7BY64 318 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 FKTNO75072 461 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 IGDCC3Q8IVU1 814 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 SLC25A21Q9BQT8 299 aaPredicted RBP18.29■□□□□ 0.52
HDAC4-201ENST00000345617 TUBGCP6Q96RT7 1819 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 MAGEB4O15481 346 aaPredicted RBP18.29■□□□□ 0.52
HDAC4-201ENST00000345617 ELAVL3Q14576 367 aaKnown RBP18.29■□□□□ 0.52
HDAC4-201ENST00000345617 ZNF454Q8N9F8 522 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 RRAGCQ9HB90 399 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 SEMA4GQ9NTN9 838 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 CACFD1Q9UGQ2 172 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 TMEM225BP0DP42 221 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 GRB7Q14451 532 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 OR1F2PQ96R84 312 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 PSD2Q9BQI7 771 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 DOPEY2Q9Y3R5 2298 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 CEP290O15078 2479 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 UBL3O95164 117 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 LALBAP00709 142 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 TRAPPC2P0DI81 140 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 TRAPPC2BP0DI82 140 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 BMP1P13497 986 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 GAS2L1Q99501 681 aaPredicted RBP18.29■□□□□ 0.52
HDAC4-201ENST00000345617 SLC6A17Q9H1V8 727 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 V9GY05 133 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 RTCAO00442 366 aaKnown RBP18.29■□□□□ 0.52
HDAC4-201ENST00000345617 MSTNO14793 375 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 ADARB1P78563 741 aaKnown RBP18.29■□□□□ 0.52
HDAC4-201ENST00000345617 BAK1Q16611 211 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 ZNF648Q5T619 568 aaPredicted RBP18.29■□□□□ 0.52
HDAC4-201ENST00000345617 DPPA2Q7Z7J5 298 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 RNF170Q96K19 258 aa18.29■□□□□ 0.52
HDAC4-201ENST00000345617 ARHGAP33O14559 1287 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 TNFSF4P23510 183 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 PRAMEF19Q5SWL8 479 aa18.28■□□□□ 0.52
HDAC4-201ENST00000345617 ZNF337Q9Y3M9 751 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms