RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 NCF4Q15080 339 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 OR1Q1Q15612 314 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 MINDY4Q4G0A6 757 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 CLEC12AQ5QGZ9 265 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 SLC34A3Q8N130 599 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 CACTIN-AS1Q8N1I8 211 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 D2HGDHQ8N465 521 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 RCBTB1Q8NDN9 531 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 TOR1AIP2Q8NFQ8 470 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 DACH2Q96NX9 599 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 C6orf62Q9GZU0 229 aaPredicted RBP17.2■□□□□ 0.34
HOXA9-201ENST00000343483 FSCN3Q9NQT6 498 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 OR10H1Q9Y4A9 318 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 ARHGAP33O14559 1287 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 DSCR3O14972 297 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 CKMT1AP12532 417 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 FPR3P25089 353 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 LIMK1P53667 647 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 RHAGQ02094 409 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 FUT7Q11130 342 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 DOC2BQ14184 412 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 SNAPC1Q16533 368 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 TIMM50Q3ZCQ8 353 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 SLC27A4Q6P1M0 643 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 RASSF6Q6ZTQ3 369 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 OR8D4Q8NGM9 314 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 ZNF578Q96N58 590 aaPredicted RBP17.2■□□□□ 0.34
HOXA9-201ENST00000343483 NDC1Q9BTX1 674 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 POLDIP3Q9BY77 421 aaKnown RBP17.2■□□□□ 0.34
HOXA9-201ENST00000343483 MROQ9BYG7 248 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 PNO1Q9NRX1 252 aaKnown RBP17.2■□□□□ 0.34
HOXA9-201ENST00000343483 LANCL2Q9NS86 450 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 CCDC59Q9P031 241 aaKnown RBP17.2■□□□□ 0.34
HOXA9-201ENST00000343483 CLEC2DQ9UHP7 191 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 CACNA1HO95180 2353 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 CCDC163A0A0D9SF12 145 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 FUOMA2VDF0 154 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 C17orf105B2RV13 164 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 HOXA6P31267 233 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 PLAURQ03405 335 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 OXA1LQ15070 435 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 PMS2CLQ68D20 193 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 WDR74Q6RFH5 385 aaPredicted RBP17.19■□□□□ 0.34
HOXA9-201ENST00000343483 C19orf48Q6RUI8 117 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 ATCAYQ86WG3 371 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 FAM26EQ8N5C1 309 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 CNOT9Q92600 299 aaKnown RBP17.19■□□□□ 0.34
HOXA9-201ENST00000343483 CLIP3Q96DZ5 547 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 SLC41A2Q96JW4 573 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 LRR1Q96L50 414 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 OPALINQ96PE5 141 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 KRCC1Q9NPI7 259 aaPredicted RBP17.19■□□□□ 0.34
HOXA9-201ENST00000343483 NLGN3Q9NZ94 848 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 TESQ9UGI8 421 aaKnown RBP17.19■□□□□ 0.34
HOXA9-201ENST00000343483 TP53BP1Q12888 1972 aaPredicted RBP17.19■□□□□ 0.34
HOXA9-201ENST00000343483 CT45A8P0DMV1 189 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 CT45A9P0DMV2 189 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 EPHA8P29322 1005 aaPredicted RBP17.19■□□□□ 0.34
HOXA9-201ENST00000343483 RPS3AP61247 264 aaKnown RBP17.19■□□□□ 0.34
HOXA9-201ENST00000343483 SSX1Q16384 188 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 CT45A2Q5DJT8 189 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 WDR88Q6ZMY6 472 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 MAMSTRQ6ZN01 415 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 DTWD2Q8NBA8 298 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 MVB12AQ96EY5 273 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 PRSS27Q9BQR3 290 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 PELOQ9BRX2 385 aaKnown RBP17.19■□□□□ 0.34
HOXA9-201ENST00000343483 TAPBPLQ9BX59 468 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 POLR2J2Q9GZM3 115 aaKnown RBP17.19■□□□□ 0.34
HOXA9-201ENST00000343483 LSM2Q9Y333 95 aaKnown RBP17.19■□□□□ 0.34
HOXA9-201ENST00000343483 A3GALT2U3KPV4 340 aa17.19■□□□□ 0.34
HOXA9-201ENST00000343483 CSO75390 466 aaKnown RBP17.18■□□□□ 0.34
HOXA9-201ENST00000343483 SCG5P05408 212 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 STAT5AP42229 794 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 BCAP31P51572 246 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 PPP5CP53041 499 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 PRSS42Q7Z5A4 293 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 MAML2Q8IZL2 1156 aaPredicted RBP17.18■□□□□ 0.34
HOXA9-201ENST00000343483 ZNF615Q8N8J6 731 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 GRHL3Q8TE85 626 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 TSLPQ969D9 159 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 RNF31Q96EP0 1072 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 G6PC3Q9BUM1 346 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 MND1Q9BWT6 205 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 CDADC1Q9BWV3 514 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 NXF2Q9GZY0 626 aaKnown RBP17.18■□□□□ 0.34
HOXA9-201ENST00000343483 SERTAD3Q9UJW9 196 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 CBLCQ9ULV8 474 aa17.18■□□□□ 0.34
HOXA9-201ENST00000343483 CPED1A4D0V7 1026 aa17.17■□□□□ 0.34
HOXA9-201ENST00000343483 A8MUA0 341 aa17.17■□□□□ 0.34
HOXA9-201ENST00000343483 FMO6PO60774 539 aa17.17■□□□□ 0.34
HOXA9-201ENST00000343483 DRD5P21918 477 aa17.17■□□□□ 0.34
HOXA9-201ENST00000343483 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.17■□□□□ 0.34
HOXA9-201ENST00000343483 SPHARQ15513 63 aa17.17■□□□□ 0.34
HOXA9-201ENST00000343483 SYT14P1Q58G82 188 aa17.17■□□□□ 0.34
HOXA9-201ENST00000343483 C1orf189Q5VU69 101 aa17.17■□□□□ 0.34
HOXA9-201ENST00000343483 PIGKQ92643 395 aa17.17■□□□□ 0.34
HOXA9-201ENST00000343483 OSTF1Q92882 214 aa17.17■□□□□ 0.34
HOXA9-201ENST00000343483 OR1F2PQ96R84 312 aa17.17■□□□□ 0.34
HOXA9-201ENST00000343483 PHOX2BQ99453 314 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms